RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PAK1IP1Q9NWT1 392 aaPredicted RBP10.36□□□□□ -0.75
COMMD9-208ENST00000533643 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
COMMD9-208ENST00000533643 LRCH1Q9Y2L9 728 aa10.36□□□□□ -0.75
COMMD9-208ENST00000533643 PCDHGB1Q9Y5G3 927 aa10.36□□□□□ -0.75
COMMD9-208ENST00000533643 TMEM14AQ9Y6G1 99 aa10.36□□□□□ -0.75
COMMD9-208ENST00000533643 COL12A1Q99715 3063 aa10.36□□□□□ -0.75
COMMD9-208ENST00000533643 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 IGHV1-18A0A0C4DH31 117 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 IQCMA0A1B0GVH7 501 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 DAPL1A0PJW8 107 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 IRGMA1A4Y4 181 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 A1L4Q6 167 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 PTGES3LE9PB15 166 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF670-ZNF695F2Z2N8 137 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 DOK2O60496 412 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 LYNP07948 512 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 COX5BP10606 129 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 APEX1P27695 318 aaKnown RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 DCKP27707 260 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 PEX19P40855 299 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 OPRL1P41146 370 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 KIR2DL3P43628 341 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 SLC35A2P78381 396 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 MVKQ03426 396 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF85Q03923 595 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 PLP2Q04941 152 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 C3orf36Q3SXR2 165 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF322Q6U7Q0 402 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 MEX3BQ6ZN04 569 aaKnown RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 AHSA2Q719I0 299 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 SPATC1Q76KD6 591 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 SSX6Q7RTT6 188 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF540Q8NDQ6 660 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 OR1F12Q8NHA8 337 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 RNF133Q8WVZ7 376 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 IPCEF1Q8WWN9 437 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ASB17Q8WXJ9 295 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 TMEM80Q96HE8 168 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF649Q9BS31 505 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 COPS4Q9BT78 406 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 JAM3Q9BX67 310 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 YTHDF1Q9BYJ9 559 aaKnown RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 HDHD2Q9H0R4 259 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 MOV10Q9HCE1 1003 aaKnown RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 CENPMQ9NSP4 180 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 PLEK2Q9NYT0 353 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 FBXL3Q9UKT7 428 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 DIMT1Q9UNQ2 313 aaKnown RBP10.35□□□□□ -0.75
COMMD9-208ENST00000533643 TPRKBQ9Y3C4 175 aa10.35□□□□□ -0.75
COMMD9-208ENST00000533643 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ANKHD1Q8IWZ3 2542 aaKnown RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 PRR14LQ5THK1 2151 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 M0R1B8 84 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 PHYHO14832 338 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 MAGEB4O15481 346 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 PTHP01270 115 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 CDK1P06493 297 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 CECR9P0C854 216 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 LIMS3P0CW19 117 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 LIMS4P0CW20 117 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 EPXP11678 715 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 CRYGSP22914 178 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 STOMP27105 288 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 C21orf33P30042 268 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 HTR5AP47898 357 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ETV1P50549 477 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ACTC1P68032 377 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ACTA1P68133 377 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ROM1Q03395 351 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ECH1Q13011 328 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 KRTAP27-1Q3LI81 207 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ZNF684Q5T5D7 378 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 KCTD18Q6PI47 426 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 LHFPL3Q86UP9 236 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 STX19Q8N4C7 294 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 SLC30A7Q8NEW0 376 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 FAM222BQ8WU58 562 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 SLC7A6Q92536 515 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 MYDGFQ969H8 173 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 COQ7Q99807 217 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ATF6BQ99941 703 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 TTTY10Q9BZA0 68 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 NGBQ9NPG2 151 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 INPP5EQ9NRR6 644 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 DDX28Q9NUL7 540 aaKnown RBP10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ERVK13-1Q9NX77 482 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 SLCO1C1Q9NYB5 712 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ERVK-18Q9QC07 812 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 ATPIF1Q9UII2 106 aa10.34□□□□□ -0.75
COMMD9-208ENST00000533643 SPTAN1Q13813 2472 aaKnown RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 FASNP49327 2511 aaKnown RBP10.33□□□□□ -0.76
COMMD9-208ENST00000533643 DPRXA6NFQ7 191 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 ZNF878C9JN71 531 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 PSMD9O00233 223 aa10.33□□□□□ -0.76
COMMD9-208ENST00000533643 CASKO14936 926 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms