RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NKX3-1Q99801 234 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-205ENST00000533464 ZCCHC4Q9H5U6 513 aa15.92■□□□□ 0.14
PHRF1-205ENST00000533464 SIRT3Q9NTG7 399 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-205ENST00000533464 FBXO34Q9NWN3 711 aa15.92■□□□□ 0.14
PHRF1-205ENST00000533464 MYOTQ9UBF9 498 aa15.92■□□□□ 0.14
PHRF1-205ENST00000533464 KIF25Q9UIL4 384 aa15.92■□□□□ 0.14
PHRF1-205ENST00000533464 DOCK5Q9H7D0 1870 aa15.92■□□□□ 0.14
PHRF1-205ENST00000533464 CCSO14618 274 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 TBXA2RP21731 343 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 SLC25A35Q3KQZ1 300 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 SLC51BQ86UW2 128 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 BCO1Q9HAY6 547 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 R4GMQ9 66 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 C1QBP02746 253 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 AADACL4Q5VUY2 407 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 GCM1Q9NP62 436 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 LOXL2Q9Y4K0 774 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 SULT1C2O00338 296 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 TPOP07202 933 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 EPXP11678 715 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 HLA-BQ31612 363 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 SUMF2Q8NBJ7 301 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 MENTQ9BUN1 341 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 OTOL1A6NHN0 477 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-205ENST00000533464 GABRG1Q8N1C3 465 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 LANCL2Q9NS86 450 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 TIMM10BQ9Y5J6 103 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 TIMM8BQ9Y5J9 83 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-205ENST00000533464 IGHV3-15A0A0B4J1V0 119 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 RNF212BA8MTL3 300 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 CELA2BP08218 269 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-205ENST00000533464 PRICKLE4Q2TBC4 344 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 SFRP5Q5T4F7 317 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 GABRG3Q99928 467 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 ARID1AO14497 2285 aa15.91■□□□□ 0.14
PHRF1-205ENST00000533464 COL11A2P13942 1736 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ABCD3P28288 659 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 PPP1CAP62136 330 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 NECAP2Q9NVZ3 263 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 SHANK3Q9BYB0 1731 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 SRPXP78539 464 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 RBPJQ06330 500 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 CADM4Q8NFZ8 388 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ATF6BQ99941 703 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 MMP25Q9NPA2 562 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 FAM212BQ9NTI7 297 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-205ENST00000533464 TMEM100Q9NV29 134 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 EDARQ9UNE0 448 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 HSPB2A8KAH6 182 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 SNRNP70P08621 437 aaKnown RBP15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ALOX5APP20292 161 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 IDH3GP51553 393 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-205ENST00000533464 C21orf58P58505 322 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 CDC20Q12834 499 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 HSPB2Q16082 182 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 C3orf49Q96BT1 292 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ARFGEF1Q9Y6D6 1849 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 TRPM6Q9BX84 2022 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 A0A1W2PPV4 95 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ARGFXA6NJG6 315 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 IFNA4P05014 189 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-205ENST00000533464 BTN1A1Q13410 526 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 PCK2Q16822 640 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 ZNF425Q6IV72 752 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 TEX19Q8NA77 164 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 CNTNAP3Q9BZ76 1288 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 VN1R1Q9GZP7 353 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 DEFB127Q9H1M4 99 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 HRASLSQ9HDD0 168 aa15.9■□□□□ 0.14
PHRF1-205ENST00000533464 SNAPINO95295 136 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 GABRB1P18505 474 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 NME2P22392 152 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 RAB4BP61018 213 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 IL10RAQ13651 578 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 BTLAQ7Z6A9 289 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 SPACA9Q96E40 222 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 PBOV1Q9GZY1 135 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 PCED1AQ9H1Q7 454 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 TMEM200CA6NKL6 621 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 HYAL3O43820 417 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 PRSS23O95084 383 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 IGHA2P01877 340 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 NUDCD2Q8WVJ2 157 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 AUNIPQ9H7T9 357 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 FAM60AQ9NP50 221 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 PCDHB10Q9UN67 800 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 FLVCR2Q9UPI3 526 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 K7EQS6 105 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 SCGB2A1O75556 95 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 GRPP07492 148 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 RPL35P42766 123 aaKnown RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 ZIC1Q15915 447 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 TBC1D28Q2M2D7 210 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 ZNF674Q2M3X9 581 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 CPNE4Q96A23 557 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 TUSC2O75896 110 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 RFC3P40938 356 aa15.89■□□□□ 0.13
PHRF1-205ENST00000533464 CCDC190Q86UF4 302 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms