RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 HDHD2Q9H0R4 259 aa17.53■□□□□ 0.4
CCS-208ENST00000533244 RAB1BQ9H0U4 201 aa17.53■□□□□ 0.4
CCS-208ENST00000533244 TBCCD1Q9NVR7 557 aa17.53■□□□□ 0.4
CCS-208ENST00000533244 DUSP13Q9UII6 198 aa17.53■□□□□ 0.4
CCS-208ENST00000533244 CHD3Q12873 2000 aaKnown RBP17.52■□□□□ 0.4
CCS-208ENST00000533244 IGHV4-30-2A0A087WSY4 118 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 A0A096LNT2 108 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 RIIAD1A6NNX1 92 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 H3BSA7 217 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 NGFP01138 241 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 CSF3P09919 207 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 ZNF3P17036 446 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 SPI1P17947 270 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 GINS1Q14691 196 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 MAD2L1BPQ15013 274 aaPredicted RBP17.52■□□□□ 0.4
CCS-208ENST00000533244 ELFN2Q5R3F8 820 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 CORO6Q6QEF8 472 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.52■□□□□ 0.4
CCS-208ENST00000533244 HIPK1Q86Z02 1210 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 ABHD4Q8TB40 342 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 NEU4Q8WWR8 484 aaPredicted RBP17.52■□□□□ 0.4
CCS-208ENST00000533244 LRTOMTQ8WZ04 291 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 COQ7Q99807 217 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 GABARAPL1Q9H0R8 117 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 MS4A5Q9H3V2 200 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 ELOVL3Q9HB03 270 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 SLC25A19Q9HC21 320 aa17.52■□□□□ 0.4
CCS-208ENST00000533244 IGHV3-13P01766 116 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 HLA-DQA2P01906 255 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 CLUP10909 449 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 POU1F1P28069 291 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 ALDH3B1P43353 468 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 PPP1CBP62140 327 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 PCK2Q16822 640 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 KRTAP27-1Q3LI81 207 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 TMEM255AQ5JRV8 349 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 LINC01590Q5TEZ4 76 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 MBNL2Q5VZF2 373 aaKnown RBP17.51■□□□□ 0.39
CCS-208ENST00000533244 ARL9Q6T311 187 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 LYPD4Q6UWN0 246 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 CFAP77Q6ZQR2 320 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 AMIGO2Q86SJ2 522 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 LINC00346Q8IVM7 164 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 OR51L1Q8NGJ5 315 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 SLC25A40Q8TBP6 338 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 C10orf105Q8TEF2 133 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 SLC7A6Q92536 515 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 DCLRE1CQ96SD1 692 aaKnown RBP17.51■□□□□ 0.39
CCS-208ENST00000533244 RHNO1Q9BSD3 238 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 HCAR1Q9BXC0 346 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 REG4Q9BYZ8 158 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 MYOZ1Q9NP98 299 aaPredicted RBP17.51■□□□□ 0.39
CCS-208ENST00000533244 PNRC2Q9NPJ4 139 aaKnown RBP17.51■□□□□ 0.39
CCS-208ENST00000533244 PAPOLBQ9NRJ5 636 aaKnown RBP17.51■□□□□ 0.39
CCS-208ENST00000533244 COMMD3-BMI1R4GMX3 469 aa17.51■□□□□ 0.39
CCS-208ENST00000533244 A0A1W2PPW3 197 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 RNF223E7ERA6 249 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 J3QW42 95 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 SURF4O15260 269 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 ABHD16AO95870 558 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 GYPBP06028 91 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 PSKH1P11801 424 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 SELENOVP59797 346 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 KPNB1Q14974 876 aaKnown RBP17.5■□□□□ 0.39
CCS-208ENST00000533244 RSPO1Q2MKA7 263 aaPredicted RBP17.5■□□□□ 0.39
CCS-208ENST00000533244 ZNF718Q3SXZ3 478 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 ICA1LQ8NDH6 482 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 KLF14Q8TD94 323 aaPredicted RBP17.5■□□□□ 0.39
CCS-208ENST00000533244 FAM168AQ92567 244 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 PTP4A1Q93096 173 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 SMR3AQ99954 134 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 OR2J1Q9GZK6 312 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 GSX1Q9H4S2 264 aaPredicted RBP17.5■□□□□ 0.39
CCS-208ENST00000533244 SLCO1C1Q9NYB5 712 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.5■□□□□ 0.39
CCS-208ENST00000533244 TAAR3PQ9P1P4 343 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 KIF17Q9P2E2 1029 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 CR1P17927 2039 aa17.5■□□□□ 0.39
CCS-208ENST00000533244 TVP23AA6NH52 213 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 FAM183AA6NL82 134 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 G3V2T6 193 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 HMGN1P05114 100 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 ERCC1P07992 297 aaPredicted RBP17.49■□□□□ 0.39
CCS-208ENST00000533244 DBHP09172 617 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 TUBG1P23258 451 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 MPV17P39210 176 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 TEX30Q5JUR7 227 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 SPATA46Q5T0L3 261 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 ZDHHC13Q8IUH4 622 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 IPCEF1Q8WWN9 437 aaPredicted RBP17.49■□□□□ 0.39
CCS-208ENST00000533244 MAP6Q96JE9 813 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 CDADC1Q9BWV3 514 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 TPK1Q9H3S4 243 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 TUBG2Q9NRH3 451 aa17.49■□□□□ 0.39
CCS-208ENST00000533244 NDUFS8O00217 210 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 SMAD7O15105 426 aaKnown RBP17.48■□□□□ 0.39
CCS-208ENST00000533244 SLC25A16P16260 332 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 ZNF823P16415 610 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 FMO3P31513 532 aa17.48■□□□□ 0.39
CCS-208ENST00000533244 PDLIM4P50479 330 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms