RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 RTTNQ86VV8 2226 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 MBD3L4A6NDZ8 208 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 MBD3L3A6NE82 208 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 MBD3L5A6NJ08 208 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 NPR2P20594 1047 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 PSMA1P25786 263 aaKnown RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 GABRA5P31644 462 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 HIST1H3AP68431 136 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 HIST2H3PS2Q5TEC6 136 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 VWA1Q6PCB0 445 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 CD200R1LQ6Q8B3 271 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 TMEM91Q6ZNR0 172 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 HIST2H3AQ71DI3 136 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 SKA3Q8IX90 412 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 UBE2J2Q8N2K1 259 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 PRSS35Q8N3Z0 413 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 SLC22A24Q8N4F4 322 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 OR2AJ1Q8NGZ0 328 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 MBD3L2Q8NHZ7 208 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 PDCD1LG2Q9BQ51 273 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 HDHD5Q9BXW7 423 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 UPB1Q9UBR1 384 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 OSGIN2Q9Y236 505 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 RELNP78509 3460 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 TRBV2A0A0J9YWF9 115 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 OR6C65A6NJZ3 312 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 SRSF10O75494 262 aaKnown RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 TGM4P49221 684 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 TAS2R43P59537 309 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 CCDC58Q4VC31 144 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 KLHL24Q6TFL4 600 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 DOLPP1Q86YN1 238 aa19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 MYCBPQ99417 103 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF587BE7ETH6 402 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 TNFSF13O75888 250 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 CAPZA2P47755 286 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 MFGE8Q08431 387 aaPredicted RBP19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 CCDC92Q53HC0 331 aaPredicted RBP19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 C1orf185Q5T7R7 199 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 FBXW9Q5XUX1 488 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 TFAP2EQ6VUC0 442 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF813Q6ZN06 617 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 FAM220AQ7Z4H9 259 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 CNEP1R1Q8N9A8 125 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 NAXEQ8NCW5 288 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 OR13C5Q8NGS8 318 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 OR2G2Q8NGZ5 317 aa19.24■□□□□ 0.67
PACSIN3-209ENST00000532457 TRGV8A0A0C4DH27 118 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 KIR3DL2P43630 455 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 GDI2P50395 445 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 RPS11P62280 158 aaKnown RBP eCLIP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 ALKBH1Q13686 389 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 RSPO1Q2MKA7 263 aaPredicted RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 BTLAQ7Z6A9 289 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 SMIM19Q96E16 107 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 BCL7BQ9BQE9 202 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 DCUN1D5Q9BTE7 237 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 EXOSC4Q9NPD3 245 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 TXNL4BQ9NX01 149 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 MALT1Q9UDY8 824 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 TINAGQ9UJW2 476 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 POLEQ07864 2286 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 A0A096LPE4 126 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 A0A1W2PPZ6 126 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 NOL3O60936 208 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 ZFPL1O95159 310 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 ITGA5P08648 1049 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 CST2P09228 141 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 GNLYP22749 145 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 RIDAP52758 137 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 FDX2Q6P4F2 183 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 DEGS2Q6QHC5 323 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 ABHD4Q8TB40 342 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 PRR7Q8TB68 274 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 PPIL3Q9H2H8 161 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF224Q9NZL3 707 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 SLC22A13Q9Y226 551 aa19.23■□□□□ 0.67
PACSIN3-209ENST00000532457 OR4C45A6NMZ5 311 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 IL18BPO95998 194 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 H2BFMP0C1H6 154 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 CD8BP10966 210 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF182P17025 639 aaPredicted RBP19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 ANOS1P23352 680 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 CA7P43166 264 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 EIF2S3LQ2VIR3 472 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 C22orf42Q6IC83 251 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 OR2A2Q6IF42 318 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF627Q7L945 461 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 RDH10Q8IZV5 341 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 RGP1Q92546 391 aaPredicted RBP19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 STARD4Q96DR4 205 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 SH3BGRL2Q9UJC5 107 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 SSR3Q9UNL2 185 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 SLC5A6Q9Y289 635 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 EMC9Q9Y3B6 208 aa19.22■□□□□ 0.67
PACSIN3-209ENST00000532457 TRDV1A0A1B0GX56 115 aa19.21■□□□□ 0.67
PACSIN3-209ENST00000532457 ZNF254O75437 659 aa19.21■□□□□ 0.67
PACSIN3-209ENST00000532457 CGAP01215 116 aa19.21■□□□□ 0.67
PACSIN3-209ENST00000532457 MAGEB1P43366 347 aa19.21■□□□□ 0.67
PACSIN3-209ENST00000532457 STK11Q15831 433 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms