RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 ZNF362Q5T0B9 420 aaPredicted RBP13.24□□□□□ -0.29
CTSB-225ENST00000532409 C6orf52Q5T4I8 152 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 DNM1P34Q6PK57 102 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 LYPD4Q6UWN0 246 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 RASSF6Q6ZTQ3 369 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 HS3ST5Q8IZT8 346 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 OR52L1Q8NGH7 329 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 OR51L1Q8NGJ5 315 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
CTSB-225ENST00000532409 SNX18Q96RF0 628 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 DDOQ99489 341 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 TSSK6Q9BXA6 273 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
CTSB-225ENST00000532409 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 IL20Q9NYY1 176 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 NDRG4Q9ULP0 352 aaKnown RBP13.24□□□□□ -0.29
CTSB-225ENST00000532409 POMPQ9Y244 141 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
CTSB-225ENST00000532409 ZSCAN5BA6NJL1 495 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 AQP12BA6NM10 295 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 ICMTO60725 284 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 CDC14BO60729 498 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 LILRA1O75019 489 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 DNAJC8O75937 253 aaPredicted RBP13.23□□□□□ -0.29
CTSB-225ENST00000532409 CST1P01037 141 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 IGHV3-13P01766 116 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 PSKH1P11801 424 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 RBMXP38159 391 aaKnown RBP13.23□□□□□ -0.29
CTSB-225ENST00000532409 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
CTSB-225ENST00000532409 SELENOVP59797 346 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 TEKQ02763 1124 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 BNIP1Q12981 228 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 FLOT2Q14254 428 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 TSTQ16762 297 aaKnown RBP13.23□□□□□ -0.29
CTSB-225ENST00000532409 ZNF718Q3SXZ3 478 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 ZBTB46Q86UZ6 589 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 AQP12AQ8IXF9 295 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 IQCF1Q8N6M8 205 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 FEVQ99581 238 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 DGCR6LQ9BY27 220 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 RACGAP1Q9H0H5 632 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 MRPL22Q9NWU5 206 aaKnown RBP13.23□□□□□ -0.29
CTSB-225ENST00000532409 SLCO1C1Q9NYB5 712 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 CACNG2Q9Y698 323 aa13.23□□□□□ -0.29
CTSB-225ENST00000532409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.297e-8■■■■■ 29.2
CTSB-225ENST00000532409 TVP23AA6NH52 213 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 WNT9BO14905 357 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 GSC2O15499 205 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 SPRY3O43610 288 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 TLX2O43763 284 aaPredicted RBP13.22□□□□□ -0.29
CTSB-225ENST00000532409 IDH3BO43837 385 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 COX5BP10606 129 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 GCH1P30793 250 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 MMP15P51511 669 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 CRMP1Q14194 572 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 SPRNQ5BIV9 151 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 MBNL2Q5VZF2 373 aaKnown RBP13.22□□□□□ -0.29
CTSB-225ENST00000532409 RPL13AP3Q6NVV1 102 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 HIST2H3AQ71DI3 136 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 SNX33Q8WV41 574 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 SLCO4A1Q96BD0 722 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 MSI2Q96DH6 328 aaKnown RBP13.22□□□□□ -0.29
CTSB-225ENST00000532409 WACQ9BTA9 647 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 NARFLQ9H6Q4 476 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 ZNF275Q9NSD4 429 aaPredicted RBP13.22□□□□□ -0.29
CTSB-225ENST00000532409 STARD10Q9Y365 291 aa13.22□□□□□ -0.29
CTSB-225ENST00000532409 TCRBV3S1A0A5B6 114 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
CTSB-225ENST00000532409 FKBP6O75344 327 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 CRLF1O75462 422 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 RP2O75695 350 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 IGHV1-46P01743 117 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 GYPBP06028 91 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 CLUP10909 449 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 ZNF23P17027 643 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 GGT2P36268 569 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 ARHGDIAP52565 204 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 COX10Q12887 443 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 PSG7Q13046 419 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 CCNIQ14094 377 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 HLXQ14774 488 aaPredicted RBP13.21□□□□□ -0.29
CTSB-225ENST00000532409 RSPO1Q2MKA7 263 aaPredicted RBP13.21□□□□□ -0.29
CTSB-225ENST00000532409 SLC36A3Q495N2 470 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 CYB5R2Q6BCY4 276 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
CTSB-225ENST00000532409 LNX2Q8N448 690 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms