RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 H2BFMP0C1H6 154 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 ARR3P36575 388 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 EMX1Q04741 257 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 GSG1Q2KHT4 349 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 KCTD18Q6PI47 426 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 TMPRSS11AQ6ZMR5 421 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 KCTD8Q6ZWB6 473 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 SYT9Q86SS6 491 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 SVOPQ8N4V2 548 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 NANOGP1Q8N7R0 232 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 YIPF7Q8N8F6 280 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 C4orf36Q96KX1 117 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 OR8B4Q96RC9 309 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MND1Q9BWT6 205 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 ELOVL3Q9HB03 270 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MRM2Q9UI43 246 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MYO18BQ8IUG5 2567 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MRPS14O60783 128 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 RPP14O95059 124 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 KRT8P05787 483 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 LCKP06239 509 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 GRNP28799 593 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 CCKARP32238 428 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 HIST1H3AP68431 136 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 RAB39AQ14964 217 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 RAB35Q15286 201 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MED22Q15528 200 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 NEDD8Q15843 81 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 ELFN2Q5R3F8 820 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 HIST2H3PS2Q5TEC6 136 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 XKRXQ6PP77 449 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 HIST2H3AQ71DI3 136 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 VASH1Q7L8A9 365 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 CCDC36Q8IYA8 594 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 C17orf78Q8N4C9 275 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 RNF133Q8WVZ7 376 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 SLC7A6Q92536 515 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 RNASE6Q93091 150 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MRPL48Q96GC5 212 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 OR5M11Q96RB7 305 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 MROQ9BYG7 248 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 PNRC2Q9NPJ4 139 aaKnown RBP16.61■□□□□ 0.25
SMPD1-205ENST00000531303 B3GNT2Q9NY97 397 aa16.61■□□□□ 0.25
SMPD1-205ENST00000531303 ARPC4-TTLL3A0A0A6YYG9 625 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 METTL15A6NJ78 407 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF878C9JN71 531 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 HOXB1P14653 301 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 APEX1P27695 318 aaKnown RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 PSMB10P40306 273 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 HTR5AP47898 357 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ACTA2P62736 377 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ACTG2P63267 376 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 GALK2Q01415 458 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 EGR3Q06889 387 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 CDONQ4KMG0 1287 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 RNLSQ5VYX0 342 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 FAM220AQ7Z4H9 259 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 DPPA2Q7Z7J5 298 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ALDH16A1Q8IZ83 802 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF808Q8N4W9 903 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 CPEB3Q8NE35 698 aaKnown RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 OR1F12Q8NHA8 337 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ZC3HAV1LQ96H79 300 aaKnown RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ACOT13Q9NPJ3 140 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 ACOXLQ9NUZ1 547 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 FBXL3Q9UKT7 428 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 CAB39Q9Y376 341 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-205ENST00000531303 LRP12Q9Y561 859 aa16.6■□□□□ 0.25
SMPD1-205ENST00000531303 TMEM129A0AVI4 362 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 CLDN14O95500 239 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 MT-ND5P03915 603 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 HSMCR30P0CW71 290 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 PCMT1P22061 227 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 OPRL1P41146 370 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 IDH3GP51553 393 aaPredicted RBP16.59■□□□□ 0.25
SMPD1-205ENST00000531303 PRKXP51817 358 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 WNT4P56705 351 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 PLP2Q04941 152 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 DOC2BQ14184 412 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 TAB1Q15750 504 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 FBXL19-AS1Q494R0 122 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 TIMM23BQ5SRD1 257 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF684Q5T5D7 378 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 KLBQ86Z14 1044 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF679Q8IYX0 411 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 MUCL1Q96DR8 90 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 MS4A3Q96HJ5 214 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 BOD1Q96IK1 185 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 ATF6BQ99941 703 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 WACQ9BTA9 647 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 MRPS26Q9BYN8 205 aaKnown RBP16.59■□□□□ 0.25
SMPD1-205ENST00000531303 AMDHD2Q9Y303 409 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 N6AMT1Q9Y5N5 214 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 SLC25A15Q9Y619 301 aa16.59■□□□□ 0.25
SMPD1-205ENST00000531303 HEATR1Q9H583 2144 aaKnown RBP16.58■□□□□ 0.24
SMPD1-205ENST00000531303 IQCMA0A1B0GVH7 501 aa16.58■□□□□ 0.24
SMPD1-205ENST00000531303 F5H5K5 113 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms