RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 MVB12AQ96EY5 273 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 CMKLR1Q99788 373 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 TPSD1Q9BZJ3 242 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 G6PC2Q9NQR9 355 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 HHLA2Q9UM44 414 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 LOC107986453A0A1B0GWG9 222 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 LMX1BO60663 402 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 CRABP1P29762 137 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 PMPCAQ10713 525 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 SQSTM1Q13501 440 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 ATPAF1Q5TC12 328 aaPredicted RBP17.25■□□□□ 0.35
VPS28-213ENST00000530983 HSD17B13Q7Z5P4 300 aaPredicted RBP17.25■□□□□ 0.35
VPS28-213ENST00000530983 JAGN1Q8N5M9 183 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 OR5M9Q8NGP3 310 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 DAZLQ92904 295 aaKnown RBP17.25■□□□□ 0.35
VPS28-213ENST00000530983 ZDHHC12Q96GR4 267 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 ZNF230Q9UIE0 474 aaPredicted RBP17.25■□□□□ 0.35
VPS28-213ENST00000530983 KLK13Q9UKR3 277 aa17.25■□□□□ 0.35
VPS28-213ENST00000530983 FTCDNL1E5RQL4 147 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 ADAM10O14672 748 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 SLC26A5P58743 744 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 LYPD6Q86Y78 171 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 WDFY1Q8IWB7 410 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 ZNF441Q8N8Z8 693 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 OR1N1Q8NGS0 311 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 OR1J2Q8NGS2 313 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 FAM174AQ8TBP5 190 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 COPS7AQ9UBW8 275 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 SPDEFO95238 335 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 AHSA1O95433 338 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 CYB5AP00167 134 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 RLN2P04090 185 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 CD74P04233 296 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 DNASE1L1P49184 302 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 ARRB1P49407 418 aaPredicted RBP17.24■□□□□ 0.35
VPS28-213ENST00000530983 FMODQ06828 376 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 SLC29A4Q7RTT9 530 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 EIF4E3Q8N5X7 224 aaKnown RBP17.24■□□□□ 0.35
VPS28-213ENST00000530983 SLC26A10Q8NG04 563 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 OR1L3Q8NH93 324 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 ST7LQ8TDW4 575 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 EDEM2Q9BV94 578 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 ZNF416Q9BWM5 594 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 RAB33BQ9H082 229 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 SLCO5A1Q9H2Y9 848 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 RHBDD3Q9Y3P4 386 aa17.24■□□□□ 0.35
VPS28-213ENST00000530983 LOC101059948A0A1B0GTJ6 334 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 LOC390937A0A1W2PQ73 354 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 A0A1W2PR77 199 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 TMEM235A6NFC5 223 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 ZNF736B4DX44 427 aaPredicted RBP17.23■□□□□ 0.35
VPS28-213ENST00000530983 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
VPS28-213ENST00000530983 ISG15P05161 165 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 SHEQ5VZ18 495 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 C17orf107Q6ZR85 190 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 DCXRQ7Z4W1 244 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 STEAP2Q8NFT2 490 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 NPAS1Q99742 590 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 MYOZ1Q9NP98 299 aaPredicted RBP17.23■□□□□ 0.35
VPS28-213ENST00000530983 OR52A1Q9UKL2 312 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
VPS28-213ENST00000530983 IGHV1OR15-9A0A0B4J2B8 117 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 MEGF11A6BM72 1044 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 C2CD4DB7Z1M9 353 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 DNASE2O00115 360 aaPredicted RBP17.22■□□□□ 0.35
VPS28-213ENST00000530983 ZNF28P17035 718 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 CD38P28907 300 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 C1orf100Q5SVJ3 147 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 LINC00346Q8IVM7 164 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 PDZD9Q8IXQ8 264 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 OR4D6Q8NGJ1 314 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 OR13C8Q8NGS7 320 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 EDAQ92838 391 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 MRPS24Q96EL2 167 aaKnown RBP17.22■□□□□ 0.35
VPS28-213ENST00000530983 SLC6A7Q99884 636 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
VPS28-213ENST00000530983 ASXL3Q9C0F0 2248 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 A0A0A6YYH2 397 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 WIPF3A6NGB9 483 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 A6NJ64 397 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 MS4A18H0YCH9 400 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 SIGLEC5O15389 551 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 OR2T1O43869 369 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 FBLP22087 321 aaKnown RBP17.22■□□□□ 0.35
VPS28-213ENST00000530983 ACHEP22303 614 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 SIGLEC14Q08ET2 396 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 DHRS2Q13268 280 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 ZNF169Q14929 603 aaPredicted RBP17.22■□□□□ 0.35
VPS28-213ENST00000530983 MS4A18Q3C1V0 323 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 CORO6Q6QEF8 472 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 BPIFB2Q8N4F0 458 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 SLC7A5P2Q9GIP4 190 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 VN1R1Q9GZP7 353 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 ZNF304Q9HCX3 659 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 PCDHB16Q9NRJ7 776 aa17.22■□□□□ 0.35
VPS28-213ENST00000530983 A0A1B0GTI1 187 aa17.21■□□□□ 0.35
VPS28-213ENST00000530983 CD8AP01732 235 aa17.21■□□□□ 0.35
VPS28-213ENST00000530983 APOC3P02656 99 aa17.21■□□□□ 0.35
VPS28-213ENST00000530983 HSD11B2P80365 405 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms