RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 AADACL4Q5VUY2 407 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 LPCAT4Q643R3 524 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 ARL9Q6T311 187 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 SHFQ7M4L6 423 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 GID4Q8IVV7 300 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 C1orf174Q8IYL3 243 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 GALNT4Q8N4A0 578 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 OR1F12Q8NHA8 337 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 PIGTQ969N2 578 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 IL4I1Q96RQ9 567 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 INTS14Q96SY0 518 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 MBOAT4Q96T53 435 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 TEAD3Q99594 435 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 COQ7Q99807 217 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 VCXQ9H320 206 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 WDR76Q9H967 626 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 EIF3KQ9UBQ5 218 aaKnown RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 GDF2Q9UK05 429 aaPredicted RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 GMPPBQ9Y5P6 360 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 FREM1Q5H8C1 2179 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 LOC100130705A0A1B0GUX0 176 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 C5orf49A4QMS7 147 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 SLC22A31A6NKX4 558 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 SLC16A6O15403 523 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 SPARCP09486 303 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 DANCRP0C864 163 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 CCL2P13500 99 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 CCNOP22674 350 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 DNASE1P24855 282 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 TTKP33981 857 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 GLRXP35754 106 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 HTR5AP47898 357 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 FABP6P51161 128 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 UCP2P55851 309 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 RPS23P62266 143 aaKnown RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 RIPK1Q13546 671 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 SLC25A30Q5SVS4 291 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 AGAP6Q5VW22 663 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 B3GLCTQ6Y288 498 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 MEPCEQ7L2J0 689 aaKnown RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 ERI1Q8IV48 349 aaKnown RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 LINC00346Q8IVM7 164 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 TIGD4Q8IY51 512 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 FBXL14Q8N1E6 418 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 BBS1Q8NFJ9 593 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 FAM81AQ8TBF8 368 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 NRGNQ92686 78 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 DCLRE1CQ96SD1 692 aaKnown RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 PITX2Q99697 317 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 LIME1Q9H400 295 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 NKX1-2Q9UD57 310 aaPredicted RBP13.21□□□□□ -0.29
CCS-206ENST00000530961 PKDREJQ9NTG1 2253 aa13.21□□□□□ -0.29
CCS-206ENST00000530961 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 MPZL2O60487 215 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 ICMTO60725 284 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 SERPINF1P36955 418 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 SNRPGP62308 76 aaKnown RBP13.2□□□□□ -0.3
CCS-206ENST00000530961 SNTB2Q13425 540 aaKnown RBP13.2□□□□□ -0.3
CCS-206ENST00000530961 TMED1Q13445 227 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 MEDAGQ5VYS4 303 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 KRT80Q6KB66 452 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 MUC15Q8N387 334 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 PAQR4Q8N4S7 273 aaPredicted RBP13.2□□□□□ -0.3
CCS-206ENST00000530961 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 RFKQ969G6 155 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 MAP6Q96JE9 813 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 C4orf45Q96LM5 186 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 CCL19Q99731 98 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
CCS-206ENST00000530961 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 M0R129 80 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 DLGAP1O14490 977 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 ATE1O95260 518 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 SOD3P08294 240 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 OR4A8P0C604 315 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 BMP4P12644 408 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 CD53P19397 219 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 TUBG1P23258 451 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 THBS4P35443 961 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 NUDT6P53370 316 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 GGTLC2Q14390 218 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 ADIPOQQ15848 244 aa13.19□□□□□ -0.3
CCS-206ENST00000530961 TTC23Q5W5X9 447 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms