RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 C20orf24Q9BUV8 137 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 MBNL1Q9NR56 388 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 PRELID3BQ9Y3B1 194 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 MT-ND4LP03901 98 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 ZP3P21754 424 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 SDHBP21912 280 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 KIAA0040Q15053 153 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 FAM27D1Q5T7N8 215 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 SHEQ5VZ18 495 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 OR6K3Q8NGY3 331 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 UHRF2Q96PU4 802 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 ZNF768Q9H5H4 540 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 CHST11Q9NPF2 352 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 MICAL3Q7RTP6 2002 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 IL5P05113 134 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 GALP22466 123 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 SSX1Q16384 188 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 BRICD5Q6PL45 260 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 OR4N2Q8NGD1 307 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 SEH1LQ96EE3 360 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 C12orf57Q99622 126 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 MRPS2Q9Y399 296 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 GLI3P10071 1580 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 ANKRD61A6NGH8 418 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 HPNP05981 417 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 LIMS2Q7Z4I7 341 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 TMEM217Q8N7C4 229 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 CHRNA9Q9UGM1 479 aa14.07□□□□□ -0.16
PCDHA4-203ENST00000530339 KIR2DS1A0A191URI9 304 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 ALOX5APP20292 161 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 BCKDHBP21953 392 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 KIR2DS4P43632 304 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 RAG2P55895 527 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 KIR2DS1Q14954 304 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 OR2G3Q8NGZ4 309 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 JAM3Q9BX67 310 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 PLA2G12AQ9BZM1 189 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 KLK11Q9UBX7 282 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 EXO1Q9UQ84 846 aaKnown RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 ACSM4P0C7M7 580 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 IKZF1Q13422 519 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 C2orf76Q3KRA6 126 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 RNLSQ5VYX0 342 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 CCDC71Q8IV32 467 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 WBP2Q969T9 261 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 WDR89Q96FK6 387 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 A4GNTQ9UNA3 340 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 LAMB2P55268 1798 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 PLRG1O43660 514 aaKnown RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 KITLGP21583 273 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 MCCD1P59942 119 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 LINC00303Q3SY05 128 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 MAML2Q8IZL2 1156 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 C1orf87Q8N0U7 546 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 DERL3Q96Q80 235 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 HIPK2Q9H2X6 1198 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 CDCP1Q9H5V8 836 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 BCO1Q9HAY6 547 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 PATZ1Q9HBE1 687 aaKnown RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 PPIL1Q9Y3C6 166 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 hCG_1809904A0A1W2PP81 198 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 A0A1W2PPE2 198 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 A0A1W2PR64 198 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 A0A1W2PRV1 198 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 ZNF92Q03936 586 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 MARCH3Q86UD3 253 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 BCORP1Q8N888 145 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 OR4C16Q8NGL9 310 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 SFT2D1Q8WV19 159 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 RNF32Q9H0A6 362 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 URGCP-MRPS24S4R325 110 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 ARGFXA6NJG6 315 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 UPK1AO00322 258 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 DSCR3O14972 297 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 OR2C1O95371 312 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 SELEP16581 610 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 PHLDA2Q53GA4 152 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 GLDNQ6ZMI3 551 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 OR1S2Q8NGQ3 325 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 TEX101Q9BY14 249 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 TBC1D29Q9UFV1 150 aa14.06□□□□□ -0.16
PCDHA4-203ENST00000530339 BTBD17A6NE02 478 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 HLA-HP01893 362 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 H2AFB1P0C5Y9 115 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 FAM53BQ14153 422 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 THEM4Q5T1C6 240 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 Q6ZRG5 221 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 DND1Q8IYX4 353 aaKnown RBP14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 EVPLQ92817 2033 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 KIRREL1Q96J84 757 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 MARVELD1Q9BSK0 173 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 BANF2Q9H503 90 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 TMEM231Q9H6L2 316 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 PPP1R14DQ9NXH3 145 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 IL20Q9NYY1 176 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 UMAD1C9J7I0 102 aa14.05□□□□□ -0.16
PCDHA4-203ENST00000530339 F2RL1P55085 397 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms