RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CLMPQ9H6B4 373 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ASB8Q9H765 288 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 CTPS2Q9NRF8 586 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 UXTQ9UBK9 157 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF225Q9UK10 706 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 F11RQ9Y624 299 aaKnown RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 KPTNQ9Y664 436 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 A0A1B0GUA9 196 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 RAB19A4D1S5 217 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 E7EWF7 191 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 EIF4E2O60573 245 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 EEDO75530 441 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 FARS2O95363 451 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ETHE1O95571 254 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 KLF8O95600 359 aaPredicted RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 IFNW1P05000 195 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF250P15622 560 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 SERPINB5P36952 375 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 LHX2P50458 406 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 PLTPP55058 493 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ADARB1P78563 741 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ECH1Q13011 328 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 GUCA2BQ16661 112 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 RFX4Q33E94 735 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 TMEM255AQ5JRV8 349 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 C6orf183Q5T699 404 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 GPR107Q5VW38 600 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 LINC00173Q6ZV60 143 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 H2AFVQ71UI9 128 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 BHLHA15Q7RTS1 189 aaPredicted RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 PID1Q7Z2X4 250 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 LRRC8AQ8IWT6 810 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 GEMIN6Q8WXD5 167 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 RDH5Q92781 318 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 FAM131CQ96AQ9 280 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 CCDC124Q96CT7 223 aaKnown RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ECHDC3Q96DC8 303 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 PIK3IP1Q96FE7 263 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ECSITQ9BQ95 431 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 LZTS2Q9BRK4 669 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 PRRG3Q9BZD7 231 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 UCK2Q9BZX2 261 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 GOLPH3Q9H4A6 298 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 DMAP1Q9NPF5 467 aaPredicted RBP3.04□□□□□ -1.92
C11orf88-204ENST00000529661 PRSS16Q9NQE7 514 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ZC4H2Q9NQZ6 224 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ING4Q9UNL4 249 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 TRAPPC4Q9Y296 219 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 SLC17A4Q9Y2C5 497 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 ATP6V1DQ9Y5K8 247 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 CACNG2Q9Y698 323 aa3.04□□□□□ -1.92
C11orf88-204ENST00000529661 AQRO60306 1485 aaKnown RBP eCLIP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 A0A0B4J2A0 478 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 RSPH10B2B2RC85 870 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CDC7O00311 574 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 XKRYO14609 159 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CALUO43852 315 aaPredicted RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 GMDSO60547 372 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 HSBP1O75506 76 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CRTAPO75718 401 aaPredicted RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 VAPBO95292 243 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SERPINA5P05154 406 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 RSPH10BP0C881 870 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF17P17021 662 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 PMCHP20382 165 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SLC26A3P40879 764 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CSKP41240 450 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CRATP43155 626 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CSNK1DP48730 415 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CRISP3P54108 245 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 UCNP55089 124 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CKAP4Q07065 602 aaKnown RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 UNC119Q13432 240 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 CLINT1Q14677 625 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 COA6Q5JTJ3 125 aaKnown RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SOHLH1Q5JUK2 328 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SLC35D2Q76EJ3 337 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 DNAAF3Q8N9W5 541 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 OR10R2Q8NGX6 335 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SLC7A13Q8TCU3 470 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ZYG11BQ9C0D3 744 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ACTR3CQ9C0K3 210 aaPredicted RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 RPF2Q9H7B2 306 aaKnown RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 SHPKQ9UHJ6 478 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 NUFIP1Q9UHK0 495 aaKnown RBP3.03□□□□□ -1.92
C11orf88-204ENST00000529661 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ENPP5Q9UJA9 477 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF229Q9UJW7 825 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 GGA2Q9UJY4 613 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 HEBP2Q9Y5Z4 205 aa3.03□□□□□ -1.92
C11orf88-204ENST00000529661 ADGRA3Q8IWK6 1321 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 COL22A1Q8NFW1 1626 aaPredicted RBP3.02□□□□□ -1.93
C11orf88-204ENST00000529661 GLYATL1P3A0A0U1RQE8 302 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 WI2-2373I1.2A0A1W2PRP0 233 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 PRSS37A4D1T9 235 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 NKX2-6A6NCS4 301 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 TRPC5OSA6NMA1 111 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 CENPXA8MT69 81 aa3.02□□□□□ -1.93
C11orf88-204ENST00000529661 SCN2BO60939 215 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms