RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MRPL3P09001 348 aaKnown RBP12.13□□□□□ -0.47
USF1-209ENST00000529476 ZNF35P13682 527 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 GABRB1P18505 474 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 STOMP27105 288 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 CAPGP40121 348 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 CDH11P55287 796 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 RAB35Q15286 201 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 PCK2Q16822 640 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 ZNF691Q5VV52 312 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 DPY19L4Q7Z388 723 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 CDC20BQ86Y33 519 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 ALDH16A1Q8IZ83 802 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 PAQR4Q8N4S7 273 aaPredicted RBP12.13□□□□□ -0.47
USF1-209ENST00000529476 LILRB1Q8NHL6 650 aaPredicted RBP12.13□□□□□ -0.47
USF1-209ENST00000529476 RHOXF1Q8NHV9 184 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 MAP6Q96JE9 813 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 APOL4Q9BPW4 351 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
USF1-209ENST00000529476 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 H0YAE9 185 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 H0YJX3 145 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 SYNGR3O43761 229 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 TMCC2O75069 709 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 PTHP01270 115 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 GNAO1P09471 354 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 CCNOP22674 350 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 HTR1FP30939 366 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 APLNRP35414 380 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 HTR5AP47898 357 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 GDI2P50395 445 aaKnown RBP12.12□□□□□ -0.47
USF1-209ENST00000529476 IL5RAQ01344 420 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 HGFACQ04756 655 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
USF1-209ENST00000529476 GGTLC2Q14390 218 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 OCLNQ16625 522 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 ELFN2Q5R3F8 820 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 C6orf52Q5T4I8 152 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 IL17RDQ8NFM7 739 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 OR10S1Q8NGN2 331 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
USF1-209ENST00000529476 TFAP2CQ92754 450 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 PNRC2Q9NPJ4 139 aaKnown RBP12.12□□□□□ -0.47
USF1-209ENST00000529476 WARS2Q9UGM6 360 aaKnown RBP12.12□□□□□ -0.47
USF1-209ENST00000529476 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 ATP23Q9Y6H3 246 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 ROS1P08922 2347 aa12.12□□□□□ -0.47
USF1-209ENST00000529476 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 MPZL2O60487 215 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 APOL3O95236 402 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 COX5BP10606 129 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
USF1-209ENST00000529476 HCCSP53701 268 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 IL18R1Q13478 541 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 MAD2L1BPQ15013 274 aaPredicted RBP12.11□□□□□ -0.47
USF1-209ENST00000529476 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
USF1-209ENST00000529476 MEDAGQ5VYS4 303 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 SHFQ7M4L6 423 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 SLC16A9Q7RTY1 509 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 OR51G2Q8NGK0 314 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 ST7LQ8TDW4 575 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 APH1BQ8WW43 257 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 RFKQ969G6 155 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 AMELYQ99218 206 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
USF1-209ENST00000529476 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 UBTD1Q9HAC8 227 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 ADGRL4Q9HBW9 690 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 HAO2Q9NYQ3 351 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 KLHDC2Q9Y2U9 406 aa12.11□□□□□ -0.47
USF1-209ENST00000529476 PLCE1Q9P212 2302 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 E7EQL1 145 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 WBP4O75554 376 aaKnown RBP12.1□□□□□ -0.47
USF1-209ENST00000529476 DBHP09172 617 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 VHLP40337 213 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 NUDT6P53370 316 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 ISL1P61371 349 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 SPATC1Q76KD6 591 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 OR4F15Q8NGB8 312 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 CNIH3Q8TBE1 160 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms