RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 THEM4Q5T1C6 240 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 HES5Q5TA89 166 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 TMEM244Q5VVB8 128 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 GLT8D1Q68CQ7 371 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 ARSKQ6UWY0 536 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 NDUFAF7Q7L592 441 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 KRT74Q7RTS7 529 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 GLB1L2Q8IW92 636 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 MCEMP1Q8IX19 187 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 UBE2J2Q8N2K1 259 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 Q8NA96 180 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 OR2Y1Q8NGV0 311 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 OR5H6Q8NGV6 325 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 FCAMRQ8WWV6 532 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 SLC7A6Q92536 515 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 PHF21AQ96BD5 680 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 NAA11Q9BSU3 229 aaPredicted RBP10.48□□□□□ -0.73
USF1-208ENST00000528768 NEK6Q9HC98 313 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 STEAP1Q9UHE8 339 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 GTF2A1LQ9UNN4 478 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 FOXJ3Q9UPW0 622 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 COA3Q9Y2R0 106 aaPredicted RBP10.48□□□□□ -0.73
USF1-208ENST00000528768 GJE1A6NN92 205 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 ZNF726A6NNF4 738 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 C17orf51A8MQB3 221 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 PRR32B1ATL7 298 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 GABARAPH6UMI1 98 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 KRT33AO76009 404 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 IGHG1P01857 330 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 H2BFMP0C1H6 154 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 PRF1P14222 555 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 ACHEP22303 614 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 SLC6A1P30531 599 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 PTGS2P35354 604 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 MNDAP41218 407 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 CCL11P51671 97 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 RAG2P55895 527 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 CLRN1P58418 232 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 RPS15P62841 145 aaKnown RBP10.47□□□□□ -0.73
USF1-208ENST00000528768 MYBPHQ13203 477 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TATDN3Q17R31 274 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 WDR38Q5JTN6 314 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TIGD3Q6B0B8 471 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TMEM225Q6GV28 225 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 LCN10Q6JVE6 187 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.47□□□□□ -0.73
USF1-208ENST00000528768 PLCZ1Q86YW0 608 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 CMTM4Q8IZR5 234 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TMEM156Q8N614 296 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 FADS6Q8N9I5 356 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 OR6F1Q8NGZ6 308 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 SMIM4Q8WVI0 70 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 DEDD2Q8WXF8 326 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 RGP1Q92546 391 aaPredicted RBP10.47□□□□□ -0.73
USF1-208ENST00000528768 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TMEM106AQ96A25 262 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 RNF31Q96EP0 1072 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 DNAJA3Q96EY1 480 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 IMMP1LQ96LU5 166 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 OXGR1Q96P68 337 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 ABHD1Q96SE0 405 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 SMAD5Q99717 465 aaKnown RBP10.47□□□□□ -0.73
USF1-208ENST00000528768 ABHD6Q9BV23 337 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 TSPAN10Q9H1Z9 355 aaPredicted RBP10.47□□□□□ -0.73
USF1-208ENST00000528768 LIN7BQ9HAP6 207 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 PLEKHA1Q9HB21 404 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 DIABLOQ9NR28 239 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 STMN3Q9NZ72 180 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 HHLA2Q9UM44 414 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 CLEC4AQ9UMR7 237 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 R4GMQ9 66 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 POLEQ07864 2286 aa10.47□□□□□ -0.73
USF1-208ENST00000528768 PCNX1Q96RV3 2341 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 CCDC168Q8NDH2 2452 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 LOC102725191A0A1B0GVB3 256 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 H3BML4 177 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 EIF1BO60739 113 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 ZNF354AO60765 605 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 YES1P07947 543 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 UBCP0CG48 685 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 ZNF28P17035 718 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 DPP4P27487 766 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 CFPP27918 469 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 LAP3P28838 519 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 DCTDP32321 178 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 PTGER4P35408 488 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 FAUP35544 74 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 PTGDSP41222 190 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 GUCA1AP43080 201 aaPredicted RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 DNASE1L1P49184 302 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 BIDP55957 195 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 FOXL2P58012 376 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 CD300CQ08708 224 aa10.46□□□□□ -0.73
USF1-208ENST00000528768 SNTB2Q13425 540 aaKnown RBP10.46□□□□□ -0.73
USF1-208ENST00000528768 TOMM20Q15388 145 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms