RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CNOT2Q9NZN8 540 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GDF2Q9UK05 429 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC25A15Q9Y619 301 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FBN2P35556 2912 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PRR32B1ATL7 298 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RER1O15258 196 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FADS2O95864 444 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 IGHA1P01876 353 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR2T7P0C7T2 308 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 UBE2NP61088 152 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RAB1AP62820 205 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PSG4Q00888 419 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 EMX1Q04741 257 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SNTB1Q13884 538 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 EIF2B1Q14232 305 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TAB1Q15750 504 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NEDD8Q15843 81 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC36A2Q495M3 483 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SSX6Q7RTT6 188 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SYT9Q86SS6 491 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MDP1Q86V88 176 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CCDC36Q8IYA8 594 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR10H4Q8NGA5 316 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR10S1Q8NGN2 331 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR2T27Q8NH04 317 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C12orf43Q96C57 262 aaKnown RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ABHD6Q9BV23 337 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 WNT5BQ9H1J7 359 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR10A4Q9H209 315 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 KCNN2Q9H2S1 579 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TIMM10BQ9Y5J6 103 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 A0A1W2PQL4 384 aaPredicted RBP10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RGS10O43665 173 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TMCC2O75069 709 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 UBL3O95164 117 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 THBDP07204 575 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PCSK6P29122 969 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C21orf33P30042 268 aaPredicted RBP10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HOXC12P31275 282 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PEX19P40855 299 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PCBD1P61457 104 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF85Q03923 595 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DYNC1I2Q13409 638 aaKnown RBP10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GSG1Q2KHT4 349 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PABPC1L2AQ5JQF8 200 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF774Q6NX45 483 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DPPA2Q7Z7J5 298 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 P2RY8Q86VZ1 359 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ACBD7Q8N6N7 88 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GJC3Q8NFK1 279 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AKR7LQ8NHP1 331 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RAB2BQ8WUD1 216 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 THEM6Q8WUY1 208 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LRRC46Q96FV0 321 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TMEM80Q96HE8 168 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF75AQ96N20 296 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 WFIKKN1Q96NZ8 548 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF649Q9BS31 505 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C1QTNF6Q9BXI9 259 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TTTY10Q9BZA0 68 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RNF121Q9H920 327 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OBP2BQ9NPH6 170 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PNRC2Q9NPJ4 139 aaKnown RBP10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LAMP5Q9UJQ1 280 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DIMT1Q9UNQ2 313 aaKnown RBP10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AMDHD2Q9Y303 409 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HCFC1P51610 2035 aa10.59□□□□□ -0.71
TRAF3IP2-211ENST00000528599 UNC79Q9P2D8 2635 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 H3BMQ9 156 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 C19orf84I3L1E1 186 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MAGEB4O15481 346 aaPredicted RBP10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 RAB36O95755 333 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CDK1P06493 297 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LIMS3P0CW19 117 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LIMS4P0CW20 117 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 COL8A1P27658 744 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ARR3P36575 388 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ETV1P50549 477 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SORDQ00796 357 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SCRN3Q0VDG4 424 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PPA1Q15181 289 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SEZ6L2Q6UXD5 910 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SPATC1Q76KD6 591 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 VASH1Q7L8A9 365 aaPredicted RBP10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF584Q8IVC4 421 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms