RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 BCAS4Q8TDM0 211 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 BTBD10Q9BSF8 475 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 WACQ9BTA9 647 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 POFUT1Q9H488 388 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 SAP30LQ9HAJ7 183 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 TREM2Q9NZC2 230 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 PRPF19Q9UMS4 504 aaKnown RBP13.25□□□□□ -0.29
CAPN1-213ENST00000527897 B9D1Q9UPM9 204 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 ARPC3O15145 178 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 GASTP01350 101 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 IFNA2P01563 188 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 IGHV1-46P01743 117 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 DBHP09172 617 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 GSTM3P21266 225 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 MVKQ03426 396 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN1-213ENST00000527897 CCDC92Q53HC0 331 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-213ENST00000527897 AVPI1Q5T686 147 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 OR6V1Q8N148 313 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 CLDND2Q8NHS1 167 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 MAGIXQ9H6Y5 334 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 REEP1Q9H902 201 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 MSL2Q9HCI7 577 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 TAS2R1Q9NYW7 299 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 STARD10Q9Y365 291 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
CAPN1-213ENST00000527897 CDH10Q9Y6N8 788 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.24□□□□□ -0.292e-7■■■■□ 22.8
CAPN1-213ENST00000527897 CUBNO60494 3623 aa13.24□□□□□ -0.29
CAPN1-213ENST00000527897 IGLV1-36A0A0B4J1U3 117 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 IGHV1-69-2A0A0G2JMI3 117 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 OR6C68A6NDL8 312 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 ZSCAN5BA6NJL1 495 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 WNT9BO14905 357 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 RP2O75695 350 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 GAAP10253 952 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 MAGEA2P43356 314 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 MMP15P51511 669 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 HMGA2P52926 109 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 TMEM33P57088 247 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 TEKQ02763 1124 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 ZNF771Q7L3S4 317 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-213ENST00000527897 TRPM8Q7Z2W7 1104 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LINC01356Q8N9X3 169 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 CYB561A3Q8NBI2 242 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 NPEPL1Q8NDH3 523 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 GJC3Q8NFK1 279 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 HPS1Q92902 700 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 TRIM15Q9C019 465 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LPAR2Q9HBW0 351 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 NKIRAS2Q9NYR9 191 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LPAR3Q9UBY5 353 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 LHFPL6Q9Y693 200 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 CACNG2Q9Y698 323 aa13.23□□□□□ -0.29
CAPN1-213ENST00000527897 OR6C6A6NF89 314 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 H3BSA7 217 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 IDH3BO43837 385 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 UBOX5O94941 541 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 SOX14O95416 240 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 FAM157CP0CG43 387 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 HNF1AP20823 631 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 PYCR1P32322 319 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 MRPS11P82912 194 aaKnown RBP13.22□□□□□ -0.29
CAPN1-213ENST00000527897 PSG7Q13046 419 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 KCNMB1Q16558 191 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 HFEQ30201 348 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 FAM120AOSQ5T036 256 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 RPL13AP3Q6NVV1 102 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 PROKR2Q8NFJ6 384 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 OR8D4Q8NGM9 314 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 CCL17Q92583 94 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 ELMOD3Q96FG2 381 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 PITX2Q99697 317 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 EGLN1Q9GZT9 426 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 RACGAP1Q9H0H5 632 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 CYSLTR2Q9NS75 346 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 TMEM160Q9NX00 188 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 PTTG3PQ9NZH4 202 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 SVEP1Q4LDE5 3571 aa13.22□□□□□ -0.29
CAPN1-213ENST00000527897 CLDN25C9JDP6 229 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 GYG2O15488 501 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 ICMTO60725 284 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 CST1P01037 141 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 TFP02787 698 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 RAP2AP10114 183 aa13.21□□□□□ -0.29
CAPN1-213ENST00000527897 SRD5A1P18405 259 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms