RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 CLDN25C9JDP6 229 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 DEAF1O75398 565 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-212ENST00000527887 H1F0P07305 194 aaKnown RBP12.09□□□□□ -0.47
CAPN1-212ENST00000527887 RHCEP18577 417 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 WNT5AP41221 380 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 MAGEA2P43356 314 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 MMP15P51511 669 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 SCRN3Q0VDG4 424 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 OGFRL1Q5TC84 451 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-212ENST00000527887 ACSM5Q6NUN0 579 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 IGFN1Q86VF2 1251 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF101Q8IZC7 436 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 OR13C2Q8NGS9 318 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 SLC25A40Q8TBP6 338 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 SLC7A13Q8TCU3 470 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 RAB1CQ92928 201 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-212ENST00000527887 C4orf45Q96LM5 186 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-212ENST00000527887 CHID1Q9BWS9 393 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 IL1RAPQ9NPH3 570 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 KLHL21Q9UJP4 597 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 LRRC42Q9Y546 428 aa12.09□□□□□ -0.47
CAPN1-212ENST00000527887 A0A1W2PPL8 197 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 PRSS37A4D1T9 235 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 CDC42EP2O14613 210 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 CDC14BO60729 498 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 PTP4A3O75365 173 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 NDUFB2O95178 105 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 ITGA2P17301 1181 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 SDHAP31040 664 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 SMIM11AP58511 58 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 PPP1CBP62140 327 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
CAPN1-212ENST00000527887 ENDOGQ14249 297 aaKnown RBP12.08□□□□□ -0.48
CAPN1-212ENST00000527887 ATP6AP1Q15904 470 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 TBPL2Q6SJ96 375 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 USP51Q70EK9 711 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 FAM122BQ7Z309 247 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 PACRGLQ8N7B6 248 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 NPEPL1Q8NDH3 523 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 ABHD4Q8TB40 342 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 PKP2Q99959 881 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 OR2J1Q9GZK6 312 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 VCXQ9H320 206 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 DNAJB9Q9UBS3 223 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 AURKCQ9UQB9 309 aa12.08□□□□□ -0.48
CAPN1-212ENST00000527887 TEX13CA0A0J9YWL9 993 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 J3QW42 95 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 IGHV1-46P01743 117 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 SEMG1P04279 462 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 CD55P08174 381 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 GSTM3P21266 225 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 FUT4P22083 530 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 GPR4P46093 362 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 GK3PQ14409 553 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 TSTQ16762 297 aaKnown RBP12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF774Q6NX45 483 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 DPY19L2P2Q6ZN68 376 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ADCK1Q86TW2 530 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 NRG4Q8WWG1 115 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 IPCEF1Q8WWN9 437 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-212ENST00000527887 Q96M85 177 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 NARFLQ9H6Q4 476 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 VSX1Q9NZR4 365 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-212ENST00000527887 NDUFAF4Q9P032 175 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ATPIF1Q9UII2 106 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
CAPN1-212ENST00000527887 WNT9BO14905 357 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 SGCEO43556 437 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 SPRY3O43610 288 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 KHDRBS3O75525 346 aaKnown RBP12.06□□□□□ -0.48
CAPN1-212ENST00000527887 ABHD16AO95870 558 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 TNFSF4P23510 183 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 GATA3P23771 443 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 MPV17P39210 176 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 LIMS1P48059 325 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 HSPA13P48723 471 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 ERFP50548 548 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 MVKQ03426 396 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 AQP6Q13520 282 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 MESTQ5EB52 335 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 RFPL4BQ6ZWI9 263 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 TSEN54Q7Z6J9 526 aaKnown RBP12.06□□□□□ -0.48
CAPN1-212ENST00000527887 MEX3DQ86XN8 651 aaKnown RBP12.06□□□□□ -0.48
CAPN1-212ENST00000527887 GLB1L2Q8IW92 636 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms