RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PLEKHA8Q96JA3 519 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PITX2Q99697 317 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 KCNG2Q9UJ96 466 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 C2CD3Q4AC94 2353 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 IGHV4-30-2A0A087WSY4 118 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 TMEM129A0AVI4 362 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 RER1O15258 196 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
CAPN1-209ENST00000527469 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 NAT2P11245 290 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 OSMP13725 252 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 DAOP14920 347 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF250P15622 560 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 PRKACGP22612 351 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 FMO3P31513 532 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 GRK5P34947 590 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 WNT5AP41221 380 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 BLVRAP53004 296 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 CRMP1Q14194 572 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 ELFN2Q5R3F8 820 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 CORO6Q6QEF8 472 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 HIPK1Q86Z02 1210 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 HS3ST5Q8IZT8 346 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
CAPN1-209ENST00000527469 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 DNAJC9Q8WXX5 260 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 COG8Q96MW5 612 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 SMR3AQ99954 134 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-209ENST00000527469 PAPOLBQ9NRJ5 636 aaKnown RBP11.49□□□□□ -0.57
CAPN1-209ENST00000527469 LHFPL6Q9Y693 200 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 RTTNQ86VV8 2226 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CAPN1-209ENST00000527469 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 G3V2T6 193 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 NDUFS8O00217 210 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 TFP02787 698 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 HMGN1P05114 100 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF23P17027 643 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 DBPQ10586 325 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 ECH1Q13011 328 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 CCNIQ14094 377 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 GINS1Q14691 196 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 MSMPQ1L6U9 139 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 RFPL4BQ6ZWI9 263 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 Q71RC1 249 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 ZDHHC13Q8IUH4 622 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 OR5K1Q8NHB7 308 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 IPCEF1Q8WWN9 437 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 DCLRE1CQ96SD1 692 aaKnown RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 COQ7Q99807 217 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
CAPN1-209ENST00000527469 ATPIF1Q9UII2 106 aa11.48□□□□□ -0.57
CAPN1-209ENST00000527469 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 HIVEP2P31629 2446 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 H3BSA7 217 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 GYPBP06028 91 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 SPARCP09486 303 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 SPI1P17947 270 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 TUBG1P23258 451 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 RGS6P49758 472 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 SLC25A1P53007 311 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 TAF13Q15543 124 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 PCGF3Q3KNV8 242 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 CCDC92Q53HC0 331 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 ZMAT1Q5H9K5 638 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 SLC18B1Q6NT16 456 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 DNM1P46Q6ZS02 220 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 ASRGL1Q7L266 308 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 C10orf67Q8IYJ2 551 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 KLF14Q8TD94 323 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 UBASH3BQ8TF42 649 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 SLC7A6Q92536 515 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 UTP4Q969X6 686 aaKnown RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
CAPN1-209ENST00000527469 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 CYSLTR2Q9NS75 346 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 DECR2Q9NUI1 292 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
CAPN1-209ENST00000527469 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms