RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 SPATA46Q5T0L3 261 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 AQP12AQ8IXF9 295 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 OR6V1Q8N148 313 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 OR9Q2Q8NGE9 314 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 OR4K13Q8NH42 304 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 OR1F12Q8NHA8 337 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 CCDC124Q96CT7 223 aaKnown RBP17.6■□□□□ 0.41
VPS28-206ENST00000526734 MSI2Q96DH6 328 aaKnown RBP17.6■□□□□ 0.41
VPS28-206ENST00000526734 BTBD10Q9BSF8 475 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 DECR2Q9NUI1 292 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 KCNG2Q9UJ96 466 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 ZDHHC8Q9ULC8 765 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 BAIAP2Q9UQB8 552 aa17.6■□□□□ 0.41
VPS28-206ENST00000526734 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
VPS28-206ENST00000526734 NGFP01138 241 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 IFNA2P01563 188 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 MPV17P39210 176 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 CRYBB2P43320 205 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 MAGEB1P43366 347 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 CENPAP49450 140 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 MMP15P51511 669 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 HIST1H3AP68431 136 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 CCL8P80075 99 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 COX10Q12887 443 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 MICAQ29983 383 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 HIST2H3PS2Q5TEC6 136 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 HIST2H3AQ71DI3 136 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 PRIMA1Q86XR5 153 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 SLC26A10Q8NG04 563 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 TSSK2Q96PF2 358 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 COQ7Q99807 217 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 THTPAQ9BU02 230 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 DGCR6LQ9BY27 220 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 RPRD1BQ9NQG5 326 aaKnown RBP17.59■□□□□ 0.41
VPS28-206ENST00000526734 ZNF275Q9NSD4 429 aaPredicted RBP17.59■□□□□ 0.41
VPS28-206ENST00000526734 JMJD1CQ15652 2540 aa17.59■□□□□ 0.41
VPS28-206ENST00000526734 LYNX1G3V0Z9 82 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 DCTN6O00399 190 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 BHLHE40O14503 412 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 ACOT8O14734 319 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 GYG2O15488 501 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 RP2O75695 350 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 MPZL1O95297 269 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 TFP02787 698 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 LYNX1P0DP58 116 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.58■□□□□ 0.4
VPS28-206ENST00000526734 CCDC92Q53HC0 331 aaPredicted RBP17.58■□□□□ 0.4
VPS28-206ENST00000526734 AQP11Q8NBQ7 271 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 OR52E2Q8NGJ4 325 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 ELMOD3Q96FG2 381 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 C1orf159Q96HA4 380 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 EGLN1Q9GZT9 426 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 EGLN3Q9H6Z9 239 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 SAP30LQ9HAJ7 183 aa17.58■□□□□ 0.4
VPS28-206ENST00000526734 SRA1Q9HD15 236 aaKnown RBP17.58■□□□□ 0.4
VPS28-206ENST00000526734 CHD3Q12873 2000 aaKnown RBP17.58■□□□□ 0.4
VPS28-206ENST00000526734 IGHV1-69-2A0A0G2JMI3 117 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 ARRDC5A6NEK1 342 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 RER1O15258 196 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 TPD52L2O43399 206 aaKnown RBP17.57■□□□□ 0.4
VPS28-206ENST00000526734 GASTP01350 101 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 FAM157CP0CG43 387 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 HNF1AP20823 631 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 PCMT1P22061 227 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 COL8A2P25067 703 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 ECH1Q13011 328 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 CLEC12AQ5QGZ9 265 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 LNX2Q8N448 690 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 LINC01356Q8N9X3 169 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 SDR9C7Q8NEX9 313 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 OR5L1Q8NGL2 311 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 OR2T4Q8NH00 348 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 YIPF5Q969M3 257 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 SHARPINQ9H0F6 387 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 TBC1D23Q9NUY8 699 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 GRIP1Q9Y3R0 1128 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 LHFPL6Q9Y693 200 aa17.57■□□□□ 0.4
VPS28-206ENST00000526734 LRP5LA4QPB2 252 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 OR6C68A6NDL8 312 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 PPIHO43447 177 aaKnown RBP17.56■□□□□ 0.4
VPS28-206ENST00000526734 TIMM8AO60220 97 aaPredicted RBP17.56■□□□□ 0.4
VPS28-206ENST00000526734 UBOX5O94941 541 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 TGFAP01135 160 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 IGHV1-46P01743 117 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 CD55P08174 381 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 KITLGP21583 273 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 CDH15P55291 814 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 CD300LDQ6UXZ3 194 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 ADGRG5Q8IZF4 528 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 OR2T33Q8NG76 320 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 OR2AJ1Q8NGZ0 328 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 APOBEC3DQ96AK3 386 aaPredicted RBP17.56■□□□□ 0.4
VPS28-206ENST00000526734 CLPTM1LQ96KA5 538 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 CHID1Q9BWS9 393 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 CDADC1Q9BWV3 514 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 BEX2Q9BXY8 128 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 YY1AP1Q9H869 796 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 KLHL21Q9UJP4 597 aa17.56■□□□□ 0.4
VPS28-206ENST00000526734 DHRS12A0PJE2 317 aa17.55■□□□□ 0.4
VPS28-206ENST00000526734 CLDN25C9JDP6 229 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms