RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RBM14Q96PK6 669 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TTTY12Q9BZ98 90 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 EXO5Q9H790 373 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 DCLRE1BQ9H816 532 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 REEP1Q9H902 201 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ZNF556Q9HAH1 456 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 NMNAT1Q9HAN9 279 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 C12orf10Q9HB07 376 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ACKR4Q9NPB9 350 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 NOX4Q9NPH5 578 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CTPS2Q9NRF8 586 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SERINC1Q9NRX5 453 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SLC35D1Q9NTN3 355 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 MED17Q9NVC6 651 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 QPCTLQ9NXS2 382 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 RHCGQ9UBD6 479 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 DKKL1Q9UK85 242 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 VDAC3Q9Y277 283 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 NTNG1Q9Y2I2 539 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 C15orf41Q9Y2V0 281 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TMED7Q9Y3B3 224 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 A0A087WUJ7 227 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TRGV5A0A0B4J1U4 118 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 A0A0B4J2E0 115 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 A0A1B0GWA3 101 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 A0A1B0GX12 115 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 HTR3EA5X5Y0 456 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 B4DXG7 233 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 NPIPA5E9PKD4 350 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 G3V2T6 193 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 IFNL4K9M1U5 179 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TNFRSF11BO00300 401 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 FFAR1O14842 300 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TFECO14948 347 aaPredicted RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 ZNF208O43345 1280 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 CHP2O43745 196 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 EFNA2O43921 213 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 E2F6O75461 281 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 KDM4BO94953 1096 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ACTL6AO96019 429 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 THY1P04216 161 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ANPEPP15144 967 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 HTR2AP28223 471 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 IFNGR2P38484 337 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 RBM34P42696 430 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 MAGEA2P43356 314 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 DLX5P56178 289 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PMP22Q01453 160 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 SPIBQ01892 262 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 RIPK1Q13546 671 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 SNTB1Q13884 538 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 LY6DQ14210 128 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ATP6AP1Q15904 470 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 INAQ16352 499 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 BCL2A1Q16548 175 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TMEM44Q2T9K0 475 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PLPPR5Q32ZL2 321 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 RAET1LQ5VY80 246 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PODNL1Q6PEZ8 512 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ZNF730Q6ZMV8 503 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 NKAIN4Q8IVV8 208 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 RNF113BQ8IZP6 322 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 GTPBP8Q8N3Z3 284 aaPredicted RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 LINC00471Q8N535 108 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 FAM83FQ8NEG4 500 aaPredicted RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 ATP6V1C2Q8NEY4 427 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 OR52J3Q8NH60 311 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 OR5K1Q8NHB7 308 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ST7LQ8TDW4 575 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PHF10Q8WUB8 498 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 RND1Q92730 232 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 INTS12Q96CB8 462 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 CENPNQ96H22 339 aaPredicted RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 SFXN2Q96NB2 322 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 TAAR6Q96RI8 345 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 EPYCQ99645 322 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PKP2Q99959 881 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PRSS27Q9BQR3 290 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 OR2B2Q9GZK3 357 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 SEMA6AQ9H2E6 1030 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 UBQLN3Q9H347 655 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 NCOR1P1Q9H4R4 102 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ANKRD19PQ9H560 264 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 NTN4Q9HB63 628 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 CRLF2Q9HC73 371 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 AGPAT4Q9NRZ5 378 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ZNF224Q9NZL3 707 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 OSGIN1Q9UJX0 560 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 SLC7A7Q9UM01 511 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 NPIPA1Q9UND3 350 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 MED31Q9Y3C7 131 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 ZNF337Q9Y3M9 751 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 SAMHD1Q9Y3Z3 626 aaKnown RBP3.93□□□□□ -1.78
USP48-211ENST00000526044 SPIN1Q9Y657 262 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms