RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF611Q8N823 705 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 OR1F12Q8NHA8 337 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 AKAP1Q92667 903 aaKnown RBP eCLIP17.96■□□□□ 0.47
CD44-222ENST00000526025 FBXW5Q969U6 566 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 DCLRE1CQ96SD1 692 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 ADI1Q9BV57 179 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 CDH20Q9HBT6 801 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 DDX28Q9NUL7 540 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 EDARQ9UNE0 448 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 TACC2O95359 2948 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 LOC100509620A0A075B734 347 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 SNTNA6NMZ2 147 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 SPARCP09486 303 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 NR4A1P22736 598 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 HTR5AP47898 357 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 NKX6-1P78426 367 aaPredicted RBP17.95■□□□□ 0.46
CD44-222ENST00000526025 GALK2Q01415 458 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 HGFACQ04756 655 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 POU4F2Q12837 409 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 KRTAP27-1Q3LI81 207 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 OTPQ5XKR4 325 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 ZNF544Q6NX49 715 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 CORO6Q6QEF8 472 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 UNQ6126/PRO20091Q6UXV3 157 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 CFAP77Q6ZQR2 320 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 SLC16A9Q7RTY1 509 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 LINC00346Q8IVM7 164 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 OR6N2Q8NGY6 317 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 RHOXF1Q8NHV9 184 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 ZNF582Q96NG8 517 aaPredicted RBP17.95■□□□□ 0.46
CD44-222ENST00000526025 MNTQ99583 582 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 YIPF3Q9GZM5 350 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 ZNF442Q9H7R0 627 aa17.95■□□□□ 0.46
CD44-222ENST00000526025 PNRC2Q9NPJ4 139 aaKnown RBP17.95■□□□□ 0.46
CD44-222ENST00000526025 CISD1Q9NZ45 108 aaKnown RBP17.95■□□□□ 0.46
CD44-222ENST00000526025 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.95■□□□□ 0.46
CD44-222ENST00000526025 PSKH1P11801 424 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 CAPGP40121 348 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 RPS23P62266 143 aaKnown RBP17.94■□□□□ 0.46
CD44-222ENST00000526025 ZNF691Q5VV52 312 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 DCXRQ7Z4W1 244 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 BCDIN3DQ7Z5W3 292 aaKnown RBP17.94■□□□□ 0.46
CD44-222ENST00000526025 ENTHD1Q8IYW4 607 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 SETD9Q8NE22 299 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 OTOSQ8NHW6 89 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 ST7LQ8TDW4 575 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 MAP6Q96JE9 813 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 Q96MT0 163 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 CNN2Q99439 309 aaKnown RBP17.94■□□□□ 0.46
CD44-222ENST00000526025 ATF6BQ99941 703 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 DHRS9Q9BPW9 319 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 POU2F3Q9UKI9 436 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 HSPE1-MOB4S4R3N1 261 aa17.94■□□□□ 0.46
CD44-222ENST00000526025 E7EQL1 145 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 J3QW42 95 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 GLRXP35754 106 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 NUDT6P53370 316 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 KRTAP10-9P60411 292 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 ARL9Q6T311 187 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 PAMR1Q6UXH9 720 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 B3GLCTQ6Y288 498 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 DPY19L4Q7Z388 723 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 PAQR4Q8N4S7 273 aaPredicted RBP17.93■□□□□ 0.46
CD44-222ENST00000526025 CYGBQ8WWM9 190 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 UBE2FQ969M7 185 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 LURAP1Q96LR2 239 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 BCL2L14Q9BZR8 327 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 CA10Q9NS85 328 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 FAIMQ9NVQ4 179 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 DNAJC27Q9NZQ0 273 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 TMEM14AQ9Y6G1 99 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 ATP23Q9Y6H3 246 aa17.93■□□□□ 0.46
CD44-222ENST00000526025 C5orf49A4QMS7 147 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 SELENOFO60613 162 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 TUBG1P23258 451 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 RPS27P42677 84 aaKnown RBP17.92■□□□□ 0.46
CD44-222ENST00000526025 RAD52P43351 418 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 OR10S1Q8NGN2 331 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 RNF133Q8WVZ7 376 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 TFAP2CQ92754 450 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 NEUROG1Q92886 237 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 UBTD1Q9HAC8 227 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 ADGRL4Q9HBW9 690 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 TUBG2Q9NRH3 451 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 TBCCD1Q9NVR7 557 aa17.92■□□□□ 0.46
CD44-222ENST00000526025 EIF3KQ9UBQ5 218 aaKnown RBP17.92■□□□□ 0.46
CD44-222ENST00000526025 VSTM5A8MXK1 200 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 ZNF878C9JN71 531 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 ENTPD6O75354 484 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 CCL2P13500 99 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 ALOX5APP20292 161 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 APOBEC3AP31941 199 aaPredicted RBP17.91■□□□□ 0.46
CD44-222ENST00000526025 OTX1P32242 354 aaPredicted RBP17.91■□□□□ 0.46
CD44-222ENST00000526025 NAA10P41227 235 aaPredicted RBP17.91■□□□□ 0.46
CD44-222ENST00000526025 RGS6P49758 472 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 UCP2P55851 309 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 SNTB2Q13425 540 aaKnown RBP17.91■□□□□ 0.46
CD44-222ENST00000526025 EIF2B1Q14232 305 aaKnown RBP17.91■□□□□ 0.46
CD44-222ENST00000526025 SLAMF6Q96DU3 332 aa17.91■□□□□ 0.46
CD44-222ENST00000526025 ABHD6Q9BV23 337 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms