RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 DHRSXQ8N5I4 330 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 RELL2Q8NC24 303 aaPredicted RBP3.94□□□□□ -1.78
CD44-220ENST00000525688 NOXO1Q8NFA2 376 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 C8orf46Q8TAG6 207 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 PNPLA2Q96AD5 504 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 RPEQ96AT9 228 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 ZNF75AQ96N20 296 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 MBOAT7Q96N66 472 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 ATP5SQ99766 215 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 NIPSNAP3BQ9BS92 247 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 PLEKHA1Q9HB21 404 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 C19orf12Q9NSK7 152 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 TMEM181Q9P2C4 612 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
CD44-220ENST00000525688 SPATA2Q9UM82 520 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 SLC17A4Q9Y2C5 497 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 PYGO1Q9Y3Y4 419 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 WIF1Q9Y5W5 379 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 ALG6Q9Y672 507 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 MRPS18BQ9Y676 258 aaKnown RBP3.94□□□□□ -1.78
CD44-220ENST00000525688 SAR1BQ9Y6B6 198 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 ELP1O95163 1332 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 COL6A3P12111 3177 aa3.94□□□□□ -1.78
CD44-220ENST00000525688 ALPK3Q96L96 1907 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 EYSQ5T1H1 3165 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 FUOMA2VDF0 154 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 ATP5LO75964 103 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 GJB5O95377 273 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 CTDNEP1O95476 244 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 IFNA5P01569 189 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 IGHG4P01861 327 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 RPS17P08708 135 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 COX5BP10606 129 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 H2AFXP16104 143 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 CBR1P16152 277 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 C4BPBP20851 252 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 ZP3P21754 424 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 DTYMKP23919 212 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 CXCR2P25025 360 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 GCAP28676 217 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 NBL1P41271 181 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 BRCC3P46736 316 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TMED10P49755 219 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 RAG2P55895 527 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 UBE2MP61081 183 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 UBE2KP61086 200 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 C2orf54Q08AI8 447 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TPBGQ13641 420 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 SPCS2Q15005 226 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 PSG5Q15238 335 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 UBE2SQ16763 222 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 AKIRIN2Q53H80 203 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TPRG1LQ5T0D9 272 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 STEAP1BQ6NZ63 245 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 CXCL17Q6UXB2 119 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 Q6ZRG5 221 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 Q6ZSR9 355 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 CYS1Q717R9 158 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 UNC93AQ86WB7 457 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 DND1Q8IYX4 353 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 HS3ST5Q8IZT8 346 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 PGAM4Q8N0Y7 254 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 ELMOD1Q8N336 334 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 OR5L2Q8NGL0 311 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 OR5M9Q8NGP3 310 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 OR2Y1Q8NGV0 311 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 CRYGNQ8WXF5 182 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 ART4Q93070 314 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 ZNF486Q96H40 463 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 ZNF300Q96RE9 604 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 UTP23Q9BRU9 249 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 ACTR3CQ9C0K3 210 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 ELOVL4Q9GZR5 314 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 C6orf62Q9GZU0 229 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 PRO3102Q9H379 93 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TUBB1Q9H4B7 451 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 S100A14Q9HCY8 104 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 BFARQ9NZS9 450 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 TUBGCP4Q9UGJ1 667 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 STOML2Q9UJZ1 356 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 YARS2Q9Y2Z4 477 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 AK6Q9Y3D8 172 aaKnown RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 WIPI2Q9Y4P8 454 aa3.93□□□□□ -1.78
CD44-220ENST00000525688 POLR3HQ9Y535 204 aaPredicted RBP3.93□□□□□ -1.78
CD44-220ENST00000525688 TRIOBPQ9H2D6 2365 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 TRANK1O15050 2925 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 PRUNE2Q8WUY3 3088 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 CDH23Q9H251 3354 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 NPIPA5A0A0B4J1W7 369 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 A8MX80 341 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 NPIPA5E9PKD4 350 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 NPIPB9F8W1W9 429 aa3.92□□□□□ -1.78
CD44-220ENST00000525688 DCTN6O00399 190 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms