RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 DTX3Q8N9I9 347 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 PIGKQ92643 395 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 ZBTB8AQ96BR9 441 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 ELF4Q99607 663 aaPredicted RBP4.87□□□□□ -1.63
CLINT1-208ENST00000524306 CMKLR1Q99788 373 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 B3GAT1Q9P2W7 334 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 GHRLQ9UBU3 117 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 SLC5A6Q9Y289 635 aa4.87□□□□□ -1.63
CLINT1-208ENST00000524306 COA3Q9Y2R0 106 aaPredicted RBP4.87□□□□□ -1.63
CLINT1-208ENST00000524306 METTL21EPA6NDL7 271 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 RFPL4AA6NLU0 287 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 C11orf98E9PRG8 122 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 RFPL4AL1F8VTS6 287 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 DNPH1O43598 174 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 NUDT14O95848 222 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 HLA-DQA2P01906 255 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 HEXBP07686 556 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PPP3CBP16298 524 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 EPHA8P29322 1005 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 BDKRB2P30411 391 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 MAGEB1P43366 347 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 RAB14P61106 215 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SEC61A1P61619 476 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 LSM6P62312 80 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SNRPD2P62316 118 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 EXOSC2Q13868 293 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 IL11RAQ14626 422 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ZNF260Q3ZCT1 412 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ACTBL2Q562R1 376 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 MRPL14Q6P1L8 145 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 C3orf33Q6P1S2 294 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 LRRC69Q6ZNQ3 347 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 FTMTQ8N4E7 242 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SLC22A24Q8N4F4 322 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 OR13C3Q8NGS6 347 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 OR6K3Q8NGY3 331 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 CEP76Q8TAP6 659 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SSC4DQ8WTU2 575 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 NAT6Q93015 286 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 INTS12Q96CB8 462 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SLC25A36Q96CQ1 311 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 WBP1Q96G27 269 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SLC25A44Q96H78 314 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 OXGR1Q96P68 337 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PRRT1Q99946 306 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 GINS4Q9BRT9 223 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TMEM138Q9NPI0 162 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TAS2R4Q9NYW5 299 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 GDF2Q9UK05 429 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 FLVCR2Q9UPI3 526 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 WIF1Q9Y5W5 379 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 FLVCR1Q9Y5Y0 555 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TRAV18A0A075B6X5 111 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 A0A087WV48 116 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 A0A0B4J2A0 478 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 LY6G6EA0A0G2JKS1 128 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 A0A1B0GTH9 108 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 LOC107986453A0A1B0GWG9 222 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TMEM14DPA8MWL7 114 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 DISC1C4P0D8 188 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 F5H5P2 479 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PRKNO60260 465 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 GSTP1P09211 210 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PGA4P0DJD7 388 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PGA3P0DJD8 388 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TMIGD3P0DMS9 266 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 GTF2F2P13984 249 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 CXCL12P48061 93 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 DNASE1L1P49184 302 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ZNF81P51508 661 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 EFNB2P52799 333 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SUCLG1P53597 346 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TSPAN5P62079 268 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 TLE3Q04726 772 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PMPCAQ10713 525 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PPA1Q15181 289 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PNLIPRP3Q17RR3 467 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SMUG1Q53HV7 270 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 C3P1Q6ZMU1 363 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 PLPP7Q8NBV4 271 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 NOXO1Q8NFA2 376 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 OR2M3Q8NG83 312 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 POC1BQ8TC44 478 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ELP5Q8TE02 316 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SCARB1Q8WTV0 552 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 CLIP3Q96DZ5 547 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SFXN2Q96NB2 322 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SEC22CQ9BRL7 303 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 NRSN2Q9GZP1 204 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 CDCP1Q9H5V8 836 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 MYOTQ9UBF9 498 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 ZNF69Q9UC07 566 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 KCNN3Q9UGI6 736 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 SHPKQ9UHJ6 478 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 RARRES3Q9UL19 164 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 MRPS18BQ9Y676 258 aaKnown RBP4.86□□□□□ -1.63
CLINT1-208ENST00000524306 U3KQA8 63 aa4.86□□□□□ -1.63
CLINT1-208ENST00000524306 A0A0D9SG52 128 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms