RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 PES1O00541 588 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 XKRYO14609 159 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 SLC9A3R1O14745 358 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 NUPL2O15504 423 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 KLF8O95600 359 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 LSM8O95777 96 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 LY6G6DO95868 133 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 TGM6O95932 706 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 MOSP00540 346 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 HBE1P02100 147 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 MBP02144 154 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 TPM1P09493 284 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 STAG3L2P0CL84 134 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 NUP62P37198 522 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 MXD1Q05195 221 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 ZNF630Q2M218 657 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 RFX4Q33E94 735 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 SPECC1LQ69YQ0 1117 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 ACP7Q6ZNF0 438 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 SUMF2Q8NBJ7 301 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 OR2L5Q8NG80 312 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 ACER1Q8TDN7 264 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 CA5BP1Q8WTZ4 195 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 RAB1CQ92928 201 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 LRRC58Q96CX6 371 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 MRPL37Q9BZE1 423 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 TMEM38AQ9H6F2 299 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 LZTFL1Q9NQ48 299 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 DYRK4Q9NR20 520 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 CTPS2Q9NRF8 586 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 PLSCR3Q9NRY6 295 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 ST3GAL6Q9Y274 331 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 NKTRP30414 1462 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 NCOA2Q15596 1464 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 CLTCQ00610 1675 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 CACNA1GO43497 2377 aa3.52□□□□□ -1.85
CTNNA1-233ENST00000522052 IGLV3-10A0A075B6K4 115 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 TSPAN11A1L157 253 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 AQP8O94778 261 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 ARG1P05089 322 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 NR2C1P13056 603 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 CRISP2P16562 243 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 CTRLP40313 264 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 GUCA2BQ16661 112 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 TRMT5Q32P41 509 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 HNRNPA1L2Q32P51 320 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 HSP90AA4PQ58FG1 418 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 UBE2UQ5VVX9 321 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 ANKRD22Q5VYY1 191 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 LINC00173Q6ZV60 143 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 COX15Q7KZN9 410 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 MYOCDQ8IZQ8 938 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 MREGQ8N565 214 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 CCDC54Q8NEL0 328 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 FAM3DQ96BQ1 224 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 SMIM10Q96HG1 83 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 SLC35E1Q96K37 410 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 IMMP1LQ96LU5 166 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 YTHDF1Q9BYJ9 559 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 XKR8Q9H6D3 395 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 MMP26Q9NRE1 261 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 CLN6Q9NWW5 311 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 YARS2Q9Y2Z4 477 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 HEBP2Q9Y5Z4 205 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 KDM5AP29375 1690 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 NCOA3Q9Y6Q9 1424 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 MROH1Q8NDA8 1641 aa3.51□□□□□ -1.85
CTNNA1-233ENST00000522052 RGPD1P0DJD0 1748 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 SLIT2O94813 1529 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 ASXL1Q8IXJ9 1541 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 CENPJQ9HC77 1338 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 PZPP20742 1482 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 HAT1O14929 419 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 HSBP1O75506 76 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 FLOT1O75955 427 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 FARS2O95363 451 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 KRT16P08779 473 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 RFC3P40938 356 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 GPR1P46091 355 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 NCBP2P52298 156 aaKnown RBP eCLIP3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 PSMD4P55036 377 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 GNB2P62879 340 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 LCN2P80188 198 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 ZNF33AQ06730 810 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 DAZ2Q13117 558 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 RPEL1Q2QD12 228 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 FHL5Q5TD97 284 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 GPR107Q5VW38 600 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 ULK3Q6PHR2 472 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 OAFQ86UD1 273 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 DCAF4L2Q8NA75 395 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 PIH1D2Q8WWB5 315 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 TSSK3Q96PN8 268 aa3.5□□□□□ -1.85
CTNNA1-233ENST00000522052 SIKE1Q9BRV8 207 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms