RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 A0A0X1KG70 313 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 HAX1O00165 279 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 PLPP2O43688 288 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 DEAF1O75398 565 aaPredicted RBP13.41□□□□□ -0.26
CLN8-205ENST00000520991 CD55P08174 381 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 SMIM11AP58511 58 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 LSM6P62312 80 aaKnown RBP13.41□□□□□ -0.26
CLN8-205ENST00000520991 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 SMARCD3Q6STE5 483 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 OR4M2Q8NGB6 313 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 FANK1Q8TC84 345 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 COG8Q96MW5 612 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 G6PC2Q9NQR9 355 aa13.41□□□□□ -0.26
CLN8-205ENST00000520991 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
CLN8-205ENST00000520991 IMPA2O14732 288 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 GADD45GO95257 159 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 SPIBQ01892 262 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 CDK5R2Q13319 367 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 DCAF12L2Q5VW00 463 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 PTCHD4Q6ZW05 846 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 CPLX4Q7Z7G2 160 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.4□□□□□ -0.26
CLN8-205ENST00000520991 OR2Z1Q8NG97 314 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 SLC7A6Q92536 515 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 CMBLQ96DG6 245 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 PYURFQ96I23 114 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 DHRS1Q96LJ7 313 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 GORASP2Q9H8Y8 452 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 MAGEL2Q9UJ55 1249 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 STARD10Q9Y365 291 aa13.4□□□□□ -0.26
CLN8-205ENST00000520991 LOC105371242A0A075B767 164 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 A0A0A6YYJ9 748 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 OR6C6A6NF89 314 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 J3QLI3 93 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SNX3O60493 162 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 PPP1R3DO95685 299 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 TXNDC12O95881 172 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 KITLGP21583 273 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 CRABP1P29762 137 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 FXYD6P3P58550 94 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SPRNQ5BIV9 151 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 PGM2L1Q6PCE3 622 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 ST7LQ8TDW4 575 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 TSSK2Q96PF2 358 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 GPA33Q99795 319 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 NPTNQ9Y639 398 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 TANC2Q9HCD6 1990 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 RER1O15258 196 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SURF4O15260 269 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 RGS9O75916 674 aaPredicted RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 VENTXO95231 258 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 GPANK1O95872 356 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 RENP00797 406 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SBK2P0C263 348 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 HSD17B1P14061 328 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 TNFRSF1AP19438 455 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 EPHA1P21709 976 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SLC6A6P31641 620 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 RGS6P49758 472 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 CCDC92Q53HC0 331 aaPredicted RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
CLN8-205ENST00000520991 LEG1Q6P5S2 330 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 HAVCR1Q96D42 359 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 SAMD8Q96LT4 415 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 NSMCE2Q96MF7 247 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 FUZQ9BT04 418 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 TMPRSS13Q9BYE2 586 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 TMEM106BQ9NUM4 274 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 PTTG3PQ9NZH4 202 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 ATPIF1Q9UII2 106 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 PCDHB10Q9UN67 800 aa13.39□□□□□ -0.27
CLN8-205ENST00000520991 J3QW42 95 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 OR10H3O60404 316 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 AVPP01185 164 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 FABP3P05413 133 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 DBHP09172 617 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 RAC2P15153 192 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 GATA3P23771 443 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 NOS3P29474 1203 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 MSX2P35548 267 aaPredicted RBP13.38□□□□□ -0.27
CLN8-205ENST00000520991 IFNGR2P38484 337 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 LCN2P80188 198 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
CLN8-205ENST00000520991 KCNMB1Q16558 191 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 MEP1BQ16820 701 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 RFX4Q33E94 735 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 Q6ZR03 302 aa13.38□□□□□ -0.27
CLN8-205ENST00000520991 C1orf229Q6ZS94 237 aaPredicted RBP13.38□□□□□ -0.27
CLN8-205ENST00000520991 C1QL2Q7Z5L3 287 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms