RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CCDC171Q6TFL3 1326 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 UBN2Q6ZU65 1347 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 KIF24Q5T7B8 1368 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 NPATQ14207 1427 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 CNTLNQ9NXG0 1405 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 A2ML1A8K2U0 1454 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 NUP153P49790 1475 aaKnown RBP2.56□□□□□ -2
VPS13B-207ENST00000518569 KDM5AP29375 1690 aaKnown RBP2.56□□□□□ -2
VPS13B-207ENST00000518569 KCNE1BA0A087WTH5 132 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IGHV7-81A0A0B4J1V7 117 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 LOC100131303A0A0U1RQF7 123 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 FABP12A6NFH5 140 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SYCE1LA8MT33 242 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 H3BN98 237 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 M0R3G1 203 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 BTN3A3O00478 584 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 EIF3HO15372 352 aaKnown RBP eCLIP2.55□□□□□ -2
VPS13B-207ENST00000518569 XRCC2O43543 280 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 STX10O60499 249 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PFKFB2O60825 505 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 TBL1XO60907 577 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 HUS1O60921 280 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NPHP4O75161 1426 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 VAPBO95292 243 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PSMG1O95456 288 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 LDOC1O95751 146 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 DHFRP00374 187 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 GNAO1P09471 354 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CD3GP09693 182 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IGLL1P15814 213 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PGAM1P18669 254 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ELK1P19419 428 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SERPINA2P20848 420 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CCNE1P24864 410 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CD82P27701 267 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 LAP3P28838 519 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IFNA8P32881 189 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 KDELR2P33947 212 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 MAS1LP35410 378 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 DRD3P35462 400 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IDH2P48735 452 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 MRPL19P49406 292 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 GNG10P50151 68 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PLP1P60201 277 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 RAB10P61026 200 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 KCNJ2P63252 427 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 GRB7Q14451 532 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SMCO1Q147U7 214 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR4D1Q15615 310 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ZNHIT3Q15649 155 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 POU2AF1Q16633 256 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NDUFA9Q16795 377 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IMPG1Q17R60 797 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SLC36A2Q495M3 483 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 COX19Q49B96 90 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 TMEM52BQ4KMG9 183 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 MTUS2Q5JR59 1369 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NHSL1Q5SYE7 1610 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CELF3Q5SZQ8 465 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OGFRL1Q5TC84 451 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 C9orf135Q5VTT2 229 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 METTL21CQ5VZV1 264 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 LPCAT4Q643R3 524 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR52W1Q6IF63 320 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ANKRD26P1Q6NSI1 321 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 FAHD2BQ6P2I3 314 aaPredicted RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 CCDC121Q6ZUS5 278 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SSX6Q7RTT6 188 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 LHFPL3Q86UP9 236 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NT5DC3Q86UY8 548 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ERI1Q8IV48 349 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 NALCNQ8IZF0 1738 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SLC38A6Q8IZM9 456 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 JAGN1Q8N5M9 183 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ALLCQ8N6M5 410 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CYB561A3Q8NBI2 242 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR2T33Q8NG76 320 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR5B17Q8NGF7 314 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR2D3Q8NGH3 330 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR5D18Q8NGL1 313 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR4A4PQ8NGN8 299 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OR6N2Q8NGY6 317 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NANPQ8TBE9 248 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 DTD1Q8TEA8 209 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PHF10Q8WUB8 498 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 FAM172AQ8WUF8 416 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CDS1Q92903 461 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NEIL2Q969S2 332 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NTAN1Q96AB6 310 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 C10orf35Q96D05 121 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NUS1Q96E22 293 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 FAHD2AQ96GK7 314 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 RNF170Q96K19 258 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 USP47Q96K76 1375 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 CEP170P1Q96L14 293 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ZFP3Q96NJ6 502 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 WFIKKN1Q96NZ8 548 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms