RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PPP1CBP62140 327 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 ZCCHC24Q8N2G6 241 aaKnown RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 ICA1LQ8NDH6 482 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 OR2T4Q8NH00 348 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 ABHD4Q8TB40 342 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 UBASH3BQ8TF42 649 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 FOXN4Q96NZ1 517 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 FEVQ99581 238 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 COQ7Q99807 217 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 TSSK6Q9BXA6 273 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 OR51B6Q9H340 312 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 SRA1Q9HD15 236 aaKnown RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 HINT3Q9NQE9 182 aaKnown RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 TAAR3PQ9P1P4 343 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 DNAJB9Q9UBS3 223 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 LHFPL6Q9Y693 200 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 FKBP6O75344 327 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TFP02787 698 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 ADH4P08319 380 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 ANXA8P13928 327 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 CENPAP49450 140 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 CBX1P83916 185 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TEKQ02763 1124 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 ECH1Q13011 328 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 MAD2L1BPQ15013 274 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TMEM249Q2WGJ8 235 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 KRTAP21-3Q3LHN1 58 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 CCDC92Q53HC0 331 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-210ENST00000515420 ZMAT1Q5H9K5 638 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 FAM209AQ5JX71 171 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF362Q5T0B9 420 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-210ENST00000515420 SLC35F1Q5T1Q4 408 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 RFPL4BQ6ZWI9 263 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 OR1F12Q8NHA8 337 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 SLC25A40Q8TBP6 338 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TEX47Q8TBZ9 253 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 KLF14Q8TD94 323 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-210ENST00000515420 DNAJC9Q8WXX5 260 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 NRBF2Q96F24 287 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 NIPSNAP1Q9BPW8 284 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 RBM4Q9BWF3 364 aaKnown RBP10.93□□□□□ -0.66
CLCN3-210ENST00000515420 OR2J1Q9GZK6 312 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 CMC2Q9NRP2 79 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
CLCN3-210ENST00000515420 PLSCR5A0PG75 271 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 RIIAD1A6NNX1 92 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 RER1O15258 196 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 DEAF1O75398 565 aaPredicted RBP10.92□□□□□ -0.66
CLCN3-210ENST00000515420 E2F6O75461 281 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 SOX14O95416 240 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 NGFP01138 241 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 IFNGP01579 166 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 NAT2P11245 290 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
CLCN3-210ENST00000515420 ACHEP22303 614 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 GRK5P34947 590 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 BLVRAP53004 296 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 SLC25A1P53007 311 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 PPP2R2BQ00005 443 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 RIN1Q13671 783 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 MEP1BQ16820 701 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 ELFN2Q5R3F8 820 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 SLC18B1Q6NT16 456 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
CLCN3-210ENST00000515420 SLC37A3Q8NCC5 494 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 PROKR2Q8NFJ6 384 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 OR2AJ1Q8NGZ0 328 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 RDH5Q92781 318 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 DIRC2Q96SL1 478 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 NMNAT2Q9BZQ4 307 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 FN3KQ9H479 309 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 CHODLQ9H9P2 273 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF556Q9HAH1 456 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 ARMC1Q9NVT9 282 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 PDP1Q9P0J1 537 aaPredicted RBP10.92□□□□□ -0.66
CLCN3-210ENST00000515420 CYB5R1Q9UHQ9 305 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
CLCN3-210ENST00000515420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLCN3-210ENST00000515420 NCR1O76036 304 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 GPANK1O95872 356 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 HLA-DQA2P01906 255 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 TACSTD2P09758 323 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF23P17027 643 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF3P17036 446 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 GGT2P36268 569 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 MPV17P39210 176 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 GZMKP49863 264 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 MMP15P51511 669 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 CARTPTQ16568 116 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms