RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 IL1AP01583 271 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 IGHMP01871 453 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 F13BP05160 661 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CD1AP06126 327 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 HSMCR30P0CW71 290 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 HIST1H1CP16403 213 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 NOS3P29474 1203 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 SDHAP31040 664 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OPRL1P41146 370 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CSNK1A1P48729 337 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 DAP3P51398 398 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 CTXN1P60606 82 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 LSM3P62310 102 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 ARF1P84077 181 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 LGALS3BPQ08380 585 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CAMK2DQ13557 499 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ACKR1Q16570 336 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ZNF404Q494X3 552 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ALG10Q5BKT4 473 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 PHYHD1Q5SRE7 291 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OR2G6Q5TZ20 316 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 DMRTA1Q5VZB9 504 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CARD17Q5XLA6 110 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ANKRD16Q6P6B7 361 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 TMPRSS11AQ6ZMR5 421 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 LINGO2Q7L985 606 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 HDDC2Q7Z4H3 204 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ADCK1Q86TW2 530 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CCDC36Q8IYA8 594 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 C17orf78Q8N4C9 275 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OR9Q1Q8NGQ5 310 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OR1K1Q8NGR3 316 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OR52N5Q8NH56 324 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 BCL2L2Q92843 193 aaPredicted RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 TMEM54Q969K7 222 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 WDR12Q9GZL7 423 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 NDEL1Q9GZM8 345 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 TXNIPQ9H3M7 391 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ESRP2Q9H6T0 727 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 PLEKHF2Q9H8W4 249 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 CRLF2Q9HC73 371 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 HMG20AQ9NP66 347 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 OBP2BQ9NPH6 170 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 SLC17A5Q9NRA2 495 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 BABAM2Q9NXR7 383 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 ZNF346Q9UL40 294 aaKnown RBP7.28□□□□□ -1.24
CCL28-204ENST00000514421 AMDHD2Q9Y303 409 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 IER3IP1Q9Y5U9 82 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 SLC25A15Q9Y619 301 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
CCL28-204ENST00000514421 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.27□□□□□ -1.25
CCL28-204ENST00000514421 DPRXA6NFQ7 191 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 C12orf71A8MTZ7 269 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 CLDN25C9JDP6 229 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 PLPP2O43688 288 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 WNT11O96014 354 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LALBAP00709 142 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 IGHG1P01857 330 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 OR2T7P0C7T2 308 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LOXP28300 417 aaPredicted RBP7.27□□□□□ -1.25
CCL28-204ENST00000514421 HOXC12P31275 282 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TGFBR1P36897 503 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TAS2R43P59537 309 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 HSF2Q03933 536 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 ZNF846Q147U1 533 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 CEACAM16Q2WEN9 425 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TBRG1Q3YBR2 411 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 NCMAPQ5T1S8 102 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LINC01590Q5TEZ4 76 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LCN1P1Q5VSP4 162 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LIPKQ5VXJ0 399 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LRFN4Q6PJG9 635 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 KLHL24Q6TFL4 600 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 LHFPL3Q86UP9 236 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 SYS1Q8N2H4 156 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 OR52E2Q8NGJ4 325 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 OR51G2Q8NGK0 314 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 OR2T27Q8NH04 317 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 RPS4Y2Q8TD47 263 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 GATAD2BQ8WXI9 593 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 UFD1Q92890 307 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TRMT61AQ96FX7 289 aaKnown RBP7.27□□□□□ -1.25
CCL28-204ENST00000514421 PLPPR2Q96GM1 343 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 RBP7Q96R05 134 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 SH3GL3Q99963 347 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 CHCHD6Q9BRQ6 235 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 KATNB1Q9BVA0 655 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 MRPL13Q9BYD1 178 aaKnown RBP7.27□□□□□ -1.25
CCL28-204ENST00000514421 MED20Q9H944 212 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 MARCH7Q9H992 704 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TXNL4BQ9NX01 149 aaKnown RBP7.27□□□□□ -1.25
CCL28-204ENST00000514421 SSR3Q9UNL2 185 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 MOKQ9UQ07 419 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 ADAM18Q9Y3Q7 739 aa7.27□□□□□ -1.25
CCL28-204ENST00000514421 TACC2O95359 2948 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 A0A096LPE4 126 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 LOC100506127A0A0U1RQW1 187 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 IQCMA0A1B0GVH7 501 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 A0A1W2PPZ6 126 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms