RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PRR32B1ATL7 298 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 SGCEO43556 437 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 WNT11O96014 354 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 MT-ND2P03891 347 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 PPP3CBP16298 524 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 PAX7P23759 505 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 SORDQ00796 357 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 ROM1Q03395 351 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 EGR3Q06889 387 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 RAB35Q15286 201 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 TAB1Q15750 504 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 GSG1Q2KHT4 349 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 ELFN2Q5R3F8 820 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 TMEM154Q6P9G4 183 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 KCTD18Q6PI47 426 aaPredicted RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 ZNF773Q6PK81 442 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 DEGS2Q6QHC5 323 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 ZNF322Q6U7Q0 402 aaPredicted RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 VASH1Q7L8A9 365 aaPredicted RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 MDP1Q86V88 176 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 EGFL6Q8IUX8 553 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 FAM169BQ8N8A8 192 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 HSD17B8Q92506 261 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 SLAMF6Q96DU3 332 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 ZNF75AQ96N20 296 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 OR8B4Q96RC9 309 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 MYCBPQ99417 103 aaPredicted RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 ALG8Q9BVK2 526 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 CCDC90BQ9GZT6 254 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 DDX28Q9NUL7 540 aaKnown RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 CHCHD3Q9NX63 227 aaKnown RBP10.92□□□□□ -0.66
PDPN-210ENST00000513143 PLEK2Q9NYT0 353 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 CLEC2DQ9UHP7 191 aa10.92□□□□□ -0.66
PDPN-210ENST00000513143 FLNCQ14315 2725 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 A0A1W2PR80 420 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 TMEM129A0AVI4 362 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 MAGEA13PA6NCF6 341 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 OR6C6A6NF89 314 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ZNF878C9JN71 531 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 J3QKU1 62 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SYNGR3O43761 229 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SULT1C4O75897 302 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 COX5BP10606 129 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 CBR1P16152 277 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 GRNP28799 593 aaKnown RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 OPRL1P41146 370 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ACTA2P62736 377 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ACTG2P63267 376 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDPN-210ENST00000513143 CDONQ4KMG0 1287 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 PABPC1L2AQ5JQF8 200 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ZNF774Q6NX45 483 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SSX8Q7RTT4 187 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 KCTD20Q7Z5Y7 419 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ZNF679Q8IYX0 411 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ALDH16A1Q8IZ83 802 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SPARTQ8N0X7 666 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 NANOGP1Q8N7R0 232 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 TSPAN14Q8NG11 270 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 AKR7LQ8NHP1 331 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SNX33Q8WV41 574 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 MUCL1Q96DR8 90 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 HDHD2Q9H0R4 259 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 MOV10Q9HCE1 1003 aaKnown RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 CENPMQ9NSP4 180 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 SLCO1C1Q9NYB5 712 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 CRNNQ9UBG3 495 aaPredicted RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 MRM2Q9UI43 246 aaKnown RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 ATPIF1Q9UII2 106 aa10.91□□□□□ -0.66
PDPN-210ENST00000513143 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 HEATR1Q9H583 2144 aaKnown RBP10.91□□□□□ -0.66
PDPN-210ENST00000513143 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 METTL15A6NJ78 407 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 TRIM64CA6NLI5 447 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 PSMD9O00233 223 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 MAGEB4O15481 346 aaPredicted RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 DOK2O60496 412 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ZNF254O75437 659 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 AGFG2O95081 481 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ABHD16AO95870 558 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 IGKV3-15P01624 115 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 SERPINA5P05154 406 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 RPSAP08865 295 aaKnown RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 H2BFMP0C1H6 154 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ZNF14P17017 642 aaPredicted RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 PLP2Q04941 152 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ECH1Q13011 328 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 PPA1Q15181 289 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 RSPO1Q2MKA7 263 aaPredicted RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 LRRN1Q6UXK5 716 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 PLEKHG7Q6ZR37 379 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 C22orf34Q6ZV56 151 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 KRT77Q7Z794 578 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ZNF584Q8IVC4 421 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 SYS1Q8N2H4 156 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms