RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TAS2R43P59537 309 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 GRB2P62993 217 aaKnown RBP9.51□□□□□ -0.89
PFDN1-204ENST00000512707 RAB35Q15286 201 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 MED22Q15528 200 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 GABRA6Q16445 453 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 GSG1Q2KHT4 349 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 CDONQ4KMG0 1287 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF474Q6S9Z5 364 aaPredicted RBP9.51□□□□□ -0.89
PFDN1-204ENST00000512707 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF367Q7RTV3 350 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 MED12LQ86YW9 2145 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 SKA3Q8IX90 412 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF679Q8IYX0 411 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 YIPF7Q8N8F6 280 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 HTRA1Q92743 480 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 SPTSSAQ969W0 71 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 MUCL1Q96DR8 90 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 SLAMF6Q96DU3 332 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 BOD1Q96IK1 185 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 OR10A4Q9H209 315 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 NIPAL2Q9H841 368 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 KCNJ16Q9NPI9 418 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 TRIM36Q9NQ86 728 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 CENPMQ9NSP4 180 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 JKAMPQ9P055 326 aa9.51□□□□□ -0.89
PFDN1-204ENST00000512707 ZGRF1Q86YA3 2104 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ARPC4-TTLL3A0A0A6YYG9 625 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 OR5H1A6NKK0 313 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 FAM90A27PA6NNH2 459 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 J3QLW9 94 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 RER1O15258 196 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 DOK2O60496 412 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 HLA-HP01893 362 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SCG5P05408 212 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 HTR1AP08908 422 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 LIMS3P0CW19 117 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 LIMS4P0CW20 117 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 PPP3CBP16298 524 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF19P17023 458 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF32P17041 273 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 AGAP20933 346 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 NR1H2P55055 460 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 FOXG1P55316 489 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ROM1Q03395 351 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF85Q03923 595 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 EMX1Q04741 257 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-204ENST00000512707 IRF3Q14653 427 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SPHARQ15513 63 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 NEDD8Q15843 81 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ZNF829Q3KNS6 432 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-204ENST00000512707 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ELFN2Q5R3F8 820 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 OTPQ5XKR4 325 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 XKRXQ6PP77 449 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 STAC2Q6ZMT1 411 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 NANOGP1Q8N7R0 232 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 RELL2Q8NC24 303 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-204ENST00000512707 LILRB4Q8NHJ6 448 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ST7LQ8TDW4 575 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SMAP2Q8WU79 429 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-204ENST00000512707 RNF133Q8WVZ7 376 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SGCDQ92629 289 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 C4orf36Q96KX1 117 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 OR8B4Q96RC9 309 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SIGLEC11Q96RL6 698 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ATF6BQ99941 703 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 TTTY10Q9BZA0 68 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 OR2H1Q9GZK4 316 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SP140LQ9H930 580 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ACOT13Q9NPJ3 140 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SLC17A5Q9NRA2 495 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 ATPIF1Q9UII2 106 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 COPS3Q9UNS2 423 aa9.5□□□□□ -0.89
PFDN1-204ENST00000512707 SPTAN1Q13813 2472 aaKnown RBP9.49□□□□□ -0.89
PFDN1-204ENST00000512707 OR6C6A6NF89 314 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
PFDN1-204ENST00000512707 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 COX5BP10606 129 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 PSMB9P28065 219 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 APLNRP35414 380 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 UGT2B10P36537 528 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 MAP2K4P45985 399 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 HTR5AP47898 357 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 RAB1AP62820 205 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 HIST1H3AP68431 136 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 BDH1Q02338 343 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 TP53I3Q53FA7 332 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 PABPC1L2AQ5JQF8 200 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 TIMM23BQ5SRD1 257 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 HIST2H3PS2Q5TEC6 136 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 UBE2UQ5VVX9 321 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 ARL9Q6T311 187 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 LRRN1Q6UXK5 716 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 CFAP77Q6ZQR2 320 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 HIST2H3AQ71DI3 136 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 SPATC1Q76KD6 591 aa9.49□□□□□ -0.89
PFDN1-204ENST00000512707 LURAP1LQ8IV03 231 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms