RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TMEM240Q5SV17 173 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 ASCL5Q7RTU5 278 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 OR2A1Q8NGT9 310 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 ANGPTL6Q8NI99 470 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 MED9Q9NWA0 146 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 FBXO34Q9NWN3 711 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 NUBP2Q9Y5Y2 271 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 EME2A4GXA9 379 aaPredicted RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 M0R135 149 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 CAPNS1P04632 268 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 SCG5P05408 212 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 PTGIRP43119 386 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 SELENBP1Q13228 472 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 GK2Q14410 553 aaPredicted RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 DHRS11Q6UWP2 260 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 ZPLD1Q8TCW7 415 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 KTI12Q96EK9 354 aaPredicted RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 ZNF799Q96GE5 643 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 OR2A14Q96R47 310 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 SRRQ9GZT4 340 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 TXNL4BQ9NX01 149 aaKnown RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 TMEM233B4DJY2 109 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 TULP2O00295 520 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 GAPDHSO14556 408 aaPredicted RBP8.15□□□□□ -1.11
VCAN-208ENST00000512590 P2RX6O15547 441 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 AVPR2P30518 371 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 PTGER1P34995 402 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 LIPAP38571 399 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 LYZP61626 148 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 ACSM1Q08AH1 577 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 RNPS1Q15287 305 aaKnown RBP8.15□□□□□ -1.11
VCAN-208ENST00000512590 ELAVL1Q15717 326 aaKnown RBP8.15□□□□□ -1.11
VCAN-208ENST00000512590 ADIRFQ15847 76 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 ELP2Q6IA86 826 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 GDPGP1Q6ZNW5 385 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 GRINAQ7Z429 371 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 TGIF2LXQ8IUE1 241 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 OR51A4Q8NGJ6 313 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 FAM213BQ8TBF2 198 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 TLCD1Q96CP7 247 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 ACPTQ9BZG2 426 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 OR52A5Q9H2C5 316 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 VSIG4Q9Y279 399 aa8.15□□□□□ -1.11
VCAN-208ENST00000512590 APOC3P02656 99 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 GYPBP06028 91 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SULT1A3P0DMM9 295 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SULT1A4P0DMN0 295 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SLC25A6P12236 298 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CEBPDP49716 269 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 AVPI1Q5T686 147 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 COMMD7Q86VX2 200 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR5D13Q8NGL4 314 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR2G2Q8NGZ5 317 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 TMEM163Q8TC26 289 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 TAMM41Q96BW9 452 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ISOC1Q96CN7 298 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CSNK1G3Q9Y6M4 447 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 COL1A1P02452 1464 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 CDC42BPBQ9Y5S2 1711 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 MAGEB4O15481 346 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 WDR1O75083 606 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 AIFM1O95831 613 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 NUDT7P0C024 238 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ST3GAL2Q16842 350 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 DOLPP1Q86YN1 238 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 TTC9Q92623 222 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 PELI1Q96FA3 418 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 AQP10Q96PS8 301 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 GON7Q9BXV9 100 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 VAPAQ9P0L0 249 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 V9GY05 133 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR2J2O76002 312 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 HMGN2P05204 90 aaKnown RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 QDPRP09417 244 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CALCBP10092 127 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ZNF17P17021 662 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 HLA-GP17693 338 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 FCARP24071 287 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ZNF93P35789 620 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 KIAA1024LP59773 190 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 LCN8Q6JVE9 175 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 METAP1DQ6UB28 335 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 METTL26Q96S19 204 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 INPP5KQ9BT40 448 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 KLF16Q9BXK1 252 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 TXNIPQ9H3M7 391 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SLC25A22Q9H936 323 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 IL37Q9NZH6 218 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ICAM5Q9UMF0 924 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 A0A1W2PRX2 142 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CTNSO60931 367 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 GPR32O75388 356 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms