RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LRRC36Q1X8D7 754 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 RSPO1Q2MKA7 263 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 OGFRL1Q5TC84 451 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ADCK1Q86TW2 530 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC30A7Q8NEW0 376 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC26A10Q8NG04 563 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 OR10H5Q8NGA6 315 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 AKR7LQ8NHP1 331 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 TEX47Q8TBZ9 253 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 AMELYQ99218 206 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 PIMREGQ9BSJ6 248 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 RACGAP1Q9H0H5 632 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 OR51B6Q9H340 312 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 C1orf198Q9H425 327 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 TOR3AQ9H497 397 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 WDR76Q9H967 626 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SRA1Q9HD15 236 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 PNRC2Q9NPJ4 139 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 KRT84Q9NSB2 600 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 DUSP13Q9UII6 198 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 NAV3Q8IVL0 2385 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 ARFGEF3Q5TH69 2177 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 LOC100509620A0A075B734 347 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 XKRYO14609 159 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 IDH3BO43837 385 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 GPRIN2O60269 458 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 CLIC3O95833 236 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 LCKP06239 509 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 FAM157BP0CG42 384 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 ZNF35P13682 527 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 DAOP14920 347 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 GABRB1P18505 474 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 USF1P22415 310 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 APLNRP35414 380 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 PPOXP50336 477 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SLC25A1P53007 311 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SELENOVP59797 346 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 HIST1H3AP68431 136 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 PSG4Q00888 419 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 KCNMB1Q16558 191 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 TBC1D28Q2M2D7 210 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 CCDC92Q53HC0 331 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 HIST2H3PS2Q5TEC6 136 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 FAM27BQ5VT28 67 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 RPL13AP3Q6NVV1 102 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SLC27A4Q6P1M0 643 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 PLBD1Q6P4A8 553 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 CORO6Q6QEF8 472 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 CFAP77Q6ZQR2 320 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 DNM1P46Q6ZS02 220 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 HIST2H3AQ71DI3 136 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 LINC00346Q8IVM7 164 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 ZCCHC24Q8N2G6 241 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 RFLNBQ8N5W9 214 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 OR52L1Q8NGH7 329 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 OR1J2Q8NGS2 313 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 FNDC8Q8TC99 324 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 C10orf105Q8TEF2 133 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 NEU4Q8WWR8 484 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SLC7A6Q92536 515 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SYT3Q9BQG1 590 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 POFUT1Q9H488 388 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 RIBC2Q9H4K1 309 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 RERGLQ9H628 205 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 SIAEQ9HAT2 523 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 MYOZ1Q9NP98 299 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 KIF17Q9P2E2 1029 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 FZR1Q9UM11 496 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 KLHDC2Q9Y2U9 406 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 COMMD3-BMI1R4GMX3 469 aa7.52□□□□□ -1.21
PDLIM5-213ENST00000509357 LOC390937A0A1W2PQ73 354 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 M0R233 179 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 NDUFS8O00217 210 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 RER1O15258 196 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 SYNGR3O43761 229 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 TLX2O43763 284 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 AHCYL1O43865 530 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 CD5LO43866 347 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 SELENOFO60613 162 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 KHDRBS3O75525 346 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 DBHP09172 617 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 GLRXP35754 106 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 WNT5AP41221 380 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 RAD52P43351 418 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 HCCSP53701 268 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 ERVS71-1P61550 626 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 ESRRGP62508 458 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 LOXL1Q08397 574 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 NKPD1Q17RQ9 610 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 TMEM249Q2WGJ8 235 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 KRTAP27-1Q3LI81 207 aa7.51□□□□□ -1.21
PDLIM5-213ENST00000509357 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms