RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CSNK1A1P48729 337 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 FAM205BPQ63HN1 556 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 OR10K2Q6IF99 312 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 MZT2BQ6NZ67 158 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 KLHL24Q6TFL4 600 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 SIAH3Q8IW03 269 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 DND1Q8IYX4 353 aaKnown RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 OR6X1Q8NH79 312 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 YIPF5Q969M3 257 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 ZCCHC4Q9H5U6 513 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 KLK11Q9UBX7 282 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 UBL3O95164 117 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 RAB40ALP0C0E4 278 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 CDK2P24941 298 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 CCR6P51684 374 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 TATDN3Q17R31 274 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 DCAF10Q5QP82 559 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 TMEM69Q5SWH9 247 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 ABHD17BQ5VST6 288 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 CREB3L2Q70SY1 520 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 RNF133Q8WVZ7 376 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 PHYHIPQ92561 330 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 CDC6Q99741 560 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 KDM4BO94953 1096 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 NAA40Q86UY6 237 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 VASH2Q86V25 355 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 OR9K2Q8NGE7 335 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 FGGYQ96C11 551 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 ZNF416Q9BWM5 594 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 GLTPQ9NZD2 209 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 ZNF318Q5VUA4 2279 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 C5orf63A6NC05 138 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
PHF3-209ENST00000509330 PMS2P2O95744 297 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 PRSS12P56730 875 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 RAC1P63000 192 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 H3F3AP84243 136 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 CD83Q01151 205 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 OR52I2Q8NH67 350 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 OR51E1Q8TCB6 317 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 TMEM41AQ96HV5 264 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 ALKBH3Q96Q83 286 aaPredicted RBP13.19□□□□□ -0.3
PHF3-209ENST00000509330 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
PHF3-209ENST00000509330 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 KLHL9Q9P2J3 617 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 HHLA2Q9UM44 414 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
PHF3-209ENST00000509330 NPIPB13A6NJU9 1138 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 NPIPB4C9JG80 1138 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
PHF3-209ENST00000509330 AQP8O94778 261 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 CD2P06729 351 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 NTF4P34130 210 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 POU3F4P49335 361 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 CCR9P51686 369 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 B3GALT5-AS1P59052 145 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 GABREP78334 506 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 RIN1Q13671 783 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 SLC36A2Q495M3 483 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ADAMTS14Q8WXS8 1223 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 NKD1Q969G9 470 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 PBOV1Q9GZY1 135 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 CACNG2Q9Y698 323 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ZNHIT1O43257 154 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ZNF432O94892 652 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 CD63P08962 238 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
PHF3-209ENST00000509330 SRD5A2P31213 254 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 GDNFP39905 211 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 CARD18P57730 90 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ZNF544Q6NX49 715 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
PHF3-209ENST00000509330 OR2M2Q96R28 347 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 ZMAT3Q9HA38 289 aaKnown RBP13.18□□□□□ -0.3
PHF3-209ENST00000509330 FANCFQ9NPI8 374 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 MUC6Q6W4X9 2439 aa13.18□□□□□ -0.3
PHF3-209ENST00000509330 NCOA6Q14686 2063 aaPredicted RBP13.17□□□□□ -0.3
PHF3-209ENST00000509330 F5H5K5 113 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 NEURL1O76050 574 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 TTRP02766 147 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 GIFP27352 417 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 ART1P52961 327 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
PHF3-209ENST00000509330 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
PHF3-209ENST00000509330 OR10D3Q8NH80 312 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 ABHD3Q8WU67 409 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 ITFG2Q969R8 447 aa13.17□□□□□ -0.3
PHF3-209ENST00000509330 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms