RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 KLHL36Q8N4N3 616 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 C3orf56Q8N813 242 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 DEFB108BQ8NET1 73 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 SLC7A13Q8TCU3 470 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 PTP4A1Q93096 173 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 HSH2DQ96JZ2 352 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 ZNF570Q96NI8 536 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 DCLRE1CQ96SD1 692 aaKnown RBP13□□□□□ -0.33
SMAD5-205ENST00000509297 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
SMAD5-205ENST00000509297 NRIP3Q9NQ35 241 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 UBAP1Q9NZ09 502 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 VSX1Q9NZR4 365 aaPredicted RBP13□□□□□ -0.33
SMAD5-205ENST00000509297 ARMCX1Q9P291 453 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 ENPP4Q9Y6X5 453 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 PKD1L1Q8TDX9 2849 aa13□□□□□ -0.33
SMAD5-205ENST00000509297 A8MXK9 166 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 NME4O00746 187 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 GSTA4O15217 222 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 RGS9O75916 674 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-205ENST00000509297 NDUFB2O95178 105 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 RAC2P15153 192 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SDHAP31040 664 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SLC6A9P48067 706 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 RGS6P49758 472 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SLC7A2P52569 658 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 BTG1P62324 171 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 KCNMB1Q16558 191 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 Q6ZR03 302 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 FKBP9P1Q75LS8 142 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 TSEN54Q7Z6J9 526 aaKnown RBP12.99□□□□□ -0.33
SMAD5-205ENST00000509297 POU5F2Q8N7G0 328 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 ZDHHC22Q8N966 263 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 OR2Z1Q8NG97 314 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SGMS2Q8NHU3 365 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SIGLEC11Q96RL6 698 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 POFUT1Q9H488 388 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 EFCAB1Q9HAE3 211 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 PLEK2Q9NYT0 353 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
SMAD5-205ENST00000509297 SIGLEC7Q9Y286 467 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 STARD10Q9Y365 291 aa12.99□□□□□ -0.33
SMAD5-205ENST00000509297 F5H0A9 414 aaPredicted RBP12.98□□□□□ -0.33
SMAD5-205ENST00000509297 CCDC22O60826 627 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 KHDRBS3O75525 346 aaKnown RBP12.98□□□□□ -0.33
SMAD5-205ENST00000509297 FSTL3O95633 263 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 TXNDC12O95881 172 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 SERPINA1P01009 418 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 SBK2P0C263 348 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 COX4I1P13073 169 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 ZNF12P17014 697 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 GSK3BP49841 420 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 GUCY1A3Q02108 690 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 KRR1Q13601 381 aaKnown RBP12.98□□□□□ -0.33
SMAD5-205ENST00000509297 SLC27A4Q6P1M0 643 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 PGM2L1Q6PCE3 622 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 FBXW12Q6X9E4 464 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 OR1F12Q8NHA8 337 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 RASD2Q96D21 266 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 SYT4Q9H2B2 425 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 DCAF16Q9NXF7 216 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 ASH2LQ9UBL3 628 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 EGFL7Q9UHF1 273 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 PPP1R3CQ9UQK1 317 aa12.98□□□□□ -0.33
SMAD5-205ENST00000509297 SLC16A7O60669 478 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 H1F0P07305 194 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 RHCEP18577 417 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 MDH2P40926 338 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 HIST1H3AP68431 136 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 SF3A3Q12874 501 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 ZNF154Q13106 437 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 ZMYND11Q15326 602 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 CCDC92Q53HC0 331 aaPredicted RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 HIST2H3PS2Q5TEC6 136 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 HIST2H3AQ71DI3 136 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 DOK3Q7L591 496 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 MUC20Q8N307 709 aaPredicted RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 OR2V2Q96R30 315 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 GPA33Q99795 319 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 ZMAT3Q9HA38 289 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 MMP26Q9NRE1 261 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 DDX28Q9NUL7 540 aaKnown RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 NDUFAF4Q9P032 175 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 ABCD2Q9UBJ2 740 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 RPS6KA6Q9UK32 745 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 NUP50Q9UKX7 468 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 COA3Q9Y2R0 106 aaPredicted RBP12.97□□□□□ -0.33
SMAD5-205ENST00000509297 INSIG2Q9Y5U4 225 aa12.97□□□□□ -0.33
SMAD5-205ENST00000509297 A0A1B0GWJ7 208 aa12.96□□□□□ -0.33
SMAD5-205ENST00000509297 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
SMAD5-205ENST00000509297 TMEM178BH3BS89 294 aa12.96□□□□□ -0.33
SMAD5-205ENST00000509297 SPRY1O43609 319 aaPredicted RBP12.96□□□□□ -0.33
SMAD5-205ENST00000509297 PPIAL4GP0DN37 164 aa12.96□□□□□ -0.33
SMAD5-205ENST00000509297 OMPP47874 163 aa12.96□□□□□ -0.33
SMAD5-205ENST00000509297 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms