RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SP4Q02446 784 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 TGFBR3Q03167 851 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 ZNF92Q03936 586 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 GABRA6Q16445 453 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 RPEL1Q2QD12 228 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 C18orf21Q32NC0 220 aaPredicted RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 PTPN20Q4JDL3 420 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 PAGE3Q5JUK9 113 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 TPRG1LQ5T0D9 272 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 ADNP2Q6IQ32 1131 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 PRMT9Q6P2P2 845 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 NDUFAF7Q7L592 441 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 PID1Q7Z2X4 250 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 C6orf223Q8N319 242 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 Q8N9W7 124 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 HSD17B11Q8NBQ5 300 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 NUBPLQ8TB37 319 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 PDCD6IPQ8WUM4 868 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 ACOT11Q8WXI4 607 aaPredicted RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 NDRG1Q92597 394 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 CCDC124Q96CT7 223 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 DUS3LQ96G46 650 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 RNF170Q96K19 258 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 TRNT1Q96Q11 434 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 NAPGQ99747 312 aaPredicted RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 RIOK2Q9BVS4 552 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 SCRT1Q9BWW7 348 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 OSBPL10Q9BXB5 764 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 KIR3DX1Q9H7L2 352 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 EML4Q9HC35 981 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 MRM3Q9HC36 420 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 CD209Q9NNX6 404 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 ACP6Q9NPH0 428 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 MCUBQ9NWR8 336 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 GOLGA8QA0A0J9YX86 632 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 A0A1B0GW55 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 SLC22A20A6NK97 555 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 IQCF5A8MTL0 148 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ERVV-1B6SEH8 477 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 C12orf77C9JDV5 145 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 E7EWF7 191 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 F6UB75 175 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 RFXANKO14593 260 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 AGPAT2O15120 278 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 GMDSO60547 372 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 FKBP6O75344 327 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ENTPD5O75356 428 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ZNF324O75467 553 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L2P0CJ85 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L3P0CJ86 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L5P0CJ88 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L6P0CJ89 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L7P0CJ90 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 VDAC2P45880 294 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 LHX2P50458 406 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 RORCP51449 518 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CCR8P51685 355 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ATP5J2P56134 94 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ATP6V0D1P61421 351 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 TPM4P67936 248 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CSNK1G2P78368 415 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 IRX3P78415 501 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 ACVR1Q04771 509 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 TRDNQ13061 729 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 NSDHLQ15738 373 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 SPECC1LQ69YQ0 1117 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4L9Q6RFH8 374 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 ZNF621Q6ZSS3 439 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 COPS6Q7L5N1 327 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 PRSS41Q7RTY9 318 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 OR2W3Q7Z3T1 314 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 PEX26Q7Z412 305 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 TMEM150AQ86TG1 271 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 H1FOOQ8IZA3 346 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 MDS2Q8NDY4 140 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 OR51S1Q8NGJ8 323 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ITFG1Q8TB96 612 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CCDC12Q8WUD4 166 aaPredicted RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 CACNG8Q8WXS5 425 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.9□□□□□ -1.95
DHFR-204ENST00000508282 TMEM54Q969K7 222 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 RPUSD4Q96CM3 377 aaKnown RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 PIK3IP1Q96FE7 263 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 TSSK3Q96PN8 268 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 TSG101Q99816 390 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ACBD6Q9BR61 282 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CHID1Q9BWS9 393 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 POLR2J2Q9GZM3 115 aaKnown RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 NAA50Q9GZZ1 169 aaKnown RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 POLR2J3Q9H1A7 115 aaKnown RBP2.9□□□□□ -1.95
DHFR-204ENST00000508282 OR52A5Q9H2C5 316 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 VCX3AQ9NNX9 186 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CTPS2Q9NRF8 586 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 CLN6Q9NWW5 311 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 QPCTLQ9NXS2 382 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 DUX4Q9UBX2 424 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ZNF229Q9UJW7 825 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 PSG11Q9UQ72 335 aa2.9□□□□□ -1.95
DHFR-204ENST00000508282 ASF1AQ9Y294 204 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms