RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SYNGR3O43761 229 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 DOK2O60496 412 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 THBDP07204 575 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ARR3P36575 388 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 GALEQ14376 348 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 IRF3Q14653 427 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 RAB39AQ14964 217 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 RAB35Q15286 201 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ELFN2Q5R3F8 820 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ZNF684Q5T5D7 378 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 TMEM53Q6P2H8 277 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ZNF322Q6U7Q0 402 aaPredicted RBP12.35□□□□□ -0.43
RNF4-208ENST00000507247 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 LRRN1Q6UXK5 716 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 PRSS48Q7RTY5 328 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 DPPA2Q7Z7J5 298 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 MYPOPQ86VE0 399 aaPredicted RBP12.35□□□□□ -0.43
RNF4-208ENST00000507247 P2RY8Q86VZ1 359 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ZNF584Q8IVC4 421 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 CLEC18CQ8NCF0 446 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 CPEB3Q8NE35 698 aaKnown RBP12.35□□□□□ -0.43
RNF4-208ENST00000507247 RNF133Q8WVZ7 376 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 ALG8Q9BVK2 526 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 CDCA4Q9BXL8 241 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 CCDC90BQ9GZT6 254 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 OBP2BQ9NPH6 170 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 CENPMQ9NSP4 180 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 SLCO1C1Q9NYB5 712 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 PLEK2Q9NYT0 353 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 NPAP1Q9NZP6 1156 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 EXOSC1Q9Y3B2 195 aaKnown RBP12.35□□□□□ -0.43
RNF4-208ENST00000507247 ZNF878C9JN71 531 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 C19orf84I3L1E1 186 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 PHYHO14832 338 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 ABHD16AO95870 558 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 CELA3BP08861 270 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 CBR1P16152 277 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 MYL12AP19105 171 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 OPRL1P41146 370 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 SORDQ00796 357 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 DOC2BQ14184 412 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 PPA1Q15181 289 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 CDONQ4KMG0 1287 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 TP53I3Q53FA7 332 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 OR2G6Q5TZ20 316 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 ASB17Q8WXJ9 295 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 SLC7A6Q92536 515 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 ZC3HAV1LQ96H79 300 aaKnown RBP12.34□□□□□ -0.43
RNF4-208ENST00000507247 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
RNF4-208ENST00000507247 DDX28Q9NUL7 540 aaKnown RBP12.34□□□□□ -0.43
RNF4-208ENST00000507247 MRM2Q9UI43 246 aaKnown RBP12.34□□□□□ -0.43
RNF4-208ENST00000507247 OR6C6A6NF89 314 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 RPSAP08865 295 aaKnown RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 ZNF14P17017 642 aaPredicted RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 APEX1P27695 318 aaKnown RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 MAP2K4P45985 399 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 IDH3GP51553 393 aaPredicted RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 OR12D2P58182 307 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 ROM1Q03395 351 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 EGR3Q06889 387 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 RNLSQ5VYX0 342 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 ZNF773Q6PK81 442 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 SSC4DQ8WTU2 575 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 SNX33Q8WV41 574 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 HSD17B8Q92506 261 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 MUCL1Q96DR8 90 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 ATF6BQ99941 703 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 HDHD2Q9H0R4 259 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 ISG20L2Q9H9L3 353 aaKnown RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 ELOVL3Q9HB03 270 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 CRNNQ9UBG3 495 aaPredicted RBP12.33□□□□□ -0.44
RNF4-208ENST00000507247 IKZF2Q9UKS7 526 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 FBXL3Q9UKT7 428 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 LRP12Q9Y561 859 aa12.33□□□□□ -0.44
RNF4-208ENST00000507247 RTTNQ86VV8 2226 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 MRPS14O60783 128 aaKnown RBP12.32□□□□□ -0.44
RNF4-208ENST00000507247 PTHP01270 115 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 IGLV1-44P01699 117 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 DBHP09172 617 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 SMIM18P0DKX4 95 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 PPP3CBP16298 524 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 CRYGSP22914 178 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 HTR5AP47898 357 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 HGFACQ04756 655 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms