RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RAB40BQ12829 278 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 KLHL22Q53GT1 634 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PABPC1L2AQ5JQF8 200 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SLC22A25Q6T423 547 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PRSS57Q6UWY2 283 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PAMR1Q6UXH9 720 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 COLCA1Q6ZS62 124 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 VASH1Q7L8A9 365 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 CPOQ8IVL8 374 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 TIGD4Q8IY51 512 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 FBXL14Q8N1E6 418 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 OR52H1Q8NGJ2 320 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 OR1F12Q8NHA8 337 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 RHOXF1Q8NHV9 184 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 RNF133Q8WVZ7 376 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 APOBEC3DQ96AK3 386 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 FBXO17Q96EF6 278 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PIK3IP1Q96FE7 263 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 POM121L2Q96KW2 1035 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 CNN2Q99439 309 aaKnown RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ATF6BQ99941 703 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SLC22A4Q9H015 551 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 RIBC2Q9H4K1 309 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 Q9H521 79 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 MOB1AQ9H8S9 216 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PLEKHF2Q9H8W4 249 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 BARX1Q9HBU1 254 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SRA1Q9HD15 236 aaKnown RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ABCB9Q9NP78 766 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 HINT3Q9NQE9 182 aaKnown RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 NPAP1Q9NZP6 1156 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ASH2LQ9UBL3 628 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 RPL36Q9Y3U8 105 aaKnown RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 LHFPL6Q9Y693 200 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 CCDC168Q8NDH2 2452 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 DHRS7CA6NNS2 312 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 M0R1B8 84 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 DCTN6O00399 190 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF593O00488 134 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 FADS2O95864 444 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 TFP02787 698 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 RAF1P04049 648 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 LYNP07948 512 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CSF3P09919 207 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 PIPP12273 146 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF250P15622 560 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 DNASE1P24855 282 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 PEX2P28328 305 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CDAP32320 146 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 DDOSTP39656 456 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 VHLP40337 213 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 HTR5AP47898 357 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 MTNR1AP48039 350 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ERFP50548 548 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF83P51522 516 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 IDH3GP51553 393 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CDH11P55287 796 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 UCP2P55851 309 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ACTA2P62736 377 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ACTG2P63267 376 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ADARB1P78563 741 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF718Q3SXZ3 478 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 C9orf135Q5VTT2 229 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF691Q5VV52 312 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 MBNL2Q5VZF2 373 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ANKRD34AQ69YU3 496 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 PLBD1Q6P4A8 553 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 TMEM200AQ86VY9 491 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CDC20BQ86Y33 519 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 KLBQ86Z14 1044 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 WDFY1Q8IWB7 410 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 C8orf59Q8N0T1 100 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 FTMTQ8N4E7 242 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 TCEANCQ8N8B7 351 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CYB561A3Q8NBI2 242 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 FAM81AQ8TBF8 368 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 SLC29A1Q99808 456 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 SH3GL3Q99963 347 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 ADI1Q9BV57 179 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 C1QTNF5Q9BXJ0 243 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 MROQ9BYG7 248 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 WNT5BQ9H1J7 359 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 MS4A5Q9H3V2 200 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CA10Q9NS85 328 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CBLN4Q9NTU7 201 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 MRPL22Q9NWU5 206 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 NKIRAS2Q9NYR9 191 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CISD1Q9NZ45 108 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CNOT2Q9NZN8 540 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 GDF2Q9UK05 429 aaPredicted RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 POU2F3Q9UKI9 436 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 RAB26Q9ULW5 256 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 RRP15Q9Y3B9 282 aaKnown RBP7.33□□□□□ -1.24
PDGFC-205ENST00000506880 CMAHPQ9Y471 501 aa7.33□□□□□ -1.24
PDGFC-205ENST00000506880 PMF1-BGLAPU3KQ54 211 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms