RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MTX2O75431 263 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 RDH16O75452 317 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 CNMDO75829 334 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 EIF4EP06730 217 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 WARSP23381 471 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 F2RP25116 425 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 SYKP43405 635 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 CCNA1P78396 465 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 MRPS22P82650 360 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 IMMTQ16891 758 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 SASS6Q6UVJ0 657 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 C16orf47Q6ZP98 133 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 LIX1Q8N485 282 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR5B3Q8NH48 314 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF502Q8TBZ5 544 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 PIBF1Q8WXW3 757 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 DUS3LQ96G46 650 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 SLC41A3Q96GZ6 507 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 DNAJC1Q96KC8 554 aaKnown RBP1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZFP3Q96NJ6 502 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 TM2D3Q9BRN9 247 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 GON7Q9BXV9 100 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 GOLT1BQ9Y3E0 138 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 ATP6V0A2Q9Y487 856 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 KCNE3Q9Y6H6 103 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 TSPOAP1O95153 1857 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZSWIM8A7E2V4 1837 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 CACNA1DQ01668 2161 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 TRAV6A0A075B6T7 132 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 IGKV1-8A0A0C4DH67 115 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 GLYATL1P3A0A0U1RQE8 302 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 CDC7O00311 574 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 NVLO15381 856 aaKnown RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 NUPL2O15504 423 aaKnown RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 DEDDO75618 318 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 SLC22A5O76082 557 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 GUCA1CO95843 209 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 NDUFB10O96000 172 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 CYB5R3P00387 301 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 CD37P11049 281 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 RAB3AP20336 220 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 GPX4P36969 197 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 PRLHRP49683 370 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 SSR4P51571 173 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 P2RX1P51575 399 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 TPMTP51580 245 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 TGFBIQ15582 683 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 FAM222AQ5U5X8 452 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 KDELC1Q6UW63 502 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 NIPA1Q7RTP0 329 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 SLC35G3Q8N808 338 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 UBE2Q2Q8WVN8 375 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 HGDQ93099 445 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF317Q96PQ6 595 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR5B12Q96R08 314 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 RSG1Q9BU20 258 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 VCX2Q9H322 139 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZSCAN16Q9H4T2 348 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 EXOSC4Q9NPD3 245 aaKnown RBP1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 VANGL2Q9ULK5 521 aa1.23□□□□□ -2.21
HMGB1P29-201ENST00000505659 C15orf38-AP3S2A0A0A6YYH1 394 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 IGHV3-72A0A0B4J1Y9 119 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 GABRR3A8MPY1 467 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 KRBOX1C9JBD0 128 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 NDUFC2-KCTD14E9PQ53 114 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 H0YCG3 227 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 J3QRE1 110 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 IL1BP01584 269 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 SERPIND1P05546 499 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 CTSLP07711 333 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 HNRNPH3P31942 346 aaKnown RBP1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 IFNA8P32881 189 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 AIF1P55008 147 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 GFERP55789 205 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 MEF2CQ06413 473 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF726P1Q15940 193 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 TCEAL5Q5H9L2 206 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 C6orf226Q5I0X4 101 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 TEX30Q5JUR7 227 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 ADNP2Q6IQ32 1131 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 CCDC73Q6ZRK6 1079 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 Q6ZSR3 168 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZSCAN30Q86W11 494 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 NKAIN4Q8IVV8 208 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF645Q8N7E2 425 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 COX18Q8N8Q8 333 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR5T1Q8NG75 326 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR2L3Q8NG85 312 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR52M1Q8NGK5 317 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 SLC7A13Q8TCU3 470 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 TCEAL3Q969E4 200 aa1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 FGF20Q9NP95 211 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P29-201ENST00000505659 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 TRIP11Q15643 1979 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 DENND4AQ7Z401 1863 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 IGHV3-49A0A0A0MS15 119 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR5H1A6NKK0 313 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR52A4PA6NMU1 304 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 CEACAM18A8MTB9 384 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms