RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PTP4A1Q93096 173 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 PERPQ96FX8 193 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 NIPSNAP1Q9BPW8 284 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 C9orf16Q9BUW7 83 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 EGLN1Q9GZT9 426 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 SLC22A4Q9H015 551 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 ASH2LQ9UBL3 628 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-220ENST00000505005 IL20RAQ9UHF4 553 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 PRR14LQ5THK1 2151 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 AKAP6Q13023 2319 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 TACC2O95359 2948 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 IGLV1-36A0A0B4J1U3 117 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 OR6C68A6NDL8 312 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 IFNL4K9M1U5 179 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 PHYHO14832 338 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 MPZL2O60487 215 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CD8AP01732 235 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 IGHV3-13P01766 116 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 APEX1P27695 318 aaKnown RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CALCRP30988 508 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 HSPA13P48723 471 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 ENTPD1P49961 510 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CDC42P60953 191 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 GRB2P62993 217 aaKnown RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 HIST1H3AP68431 136 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 POU4F2Q12837 409 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 ENDOGQ14249 297 aaKnown RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 GINS1Q14691 196 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 TAF13Q15543 124 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 SNAPC1Q16533 368 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 NKPD1Q17RQ9 610 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CLEC12BQ2HXU8 276 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 SLC35F1Q5T1Q4 408 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 OGFRL1Q5TC84 451 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 MBNL2Q5VZF2 373 aaKnown RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 KCTD18Q6PI47 426 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 HIST2H3AQ71DI3 136 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 MEX3DQ86XN8 651 aaKnown RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 FTMTQ8N4E7 242 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 SLC37A3Q8NCC5 494 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 NRGNQ92686 78 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 RFKQ969G6 155 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 SLCO4A1Q96BD0 722 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 C18orf12Q96KH6 178 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 PITX2Q99697 317 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 DOK1Q99704 481 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 ATF6BQ99941 703 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 VRK1Q99986 396 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-220ENST00000505005 HCAR1Q9BXC0 346 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 DLL4Q9NR61 685 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 REV1Q9UBZ9 1251 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CYB5R1Q9UHQ9 305 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 DUSP13Q9UII6 198 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF391Q9UJN7 358 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 TEX15Q9BXT5 2789 aa8.5□□□□□ -1.05
NR1I3-220ENST00000505005 CCDC168Q8NDH2 2452 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 IGLV3-9A0A075B6K5 115 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 IGKV1D-43A0A0B4J1Z2 117 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 A0A1W2PPW3 197 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 SLC22A31A6NKX4 558 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 H7C1C5 153 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 CELA3BP08861 270 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
NR1I3-220ENST00000505005 GAAP10253 952 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 RAC2P15153 192 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 SPI1P17947 270 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 FUT4P22083 530 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 CPT2P23786 658 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 IGFBP5P24593 272 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 GSTT1P30711 240 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 DDOSTP39656 456 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 PPP1CBP62140 327 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 LCN6P62502 163 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 PTGES3Q15185 160 aaKnown RBP8.49□□□□□ -1.05
NR1I3-220ENST00000505005 PCK2Q16822 640 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 KDM4DQ6B0I6 523 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 DEGS2Q6QHC5 323 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 DRAM2Q6UX65 266 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-220ENST00000505005 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-220ENST00000505005 EGFL6Q8IUX8 553 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF584Q8IVC4 421 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 GID4Q8IVV7 300 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 FAM168AQ92567 244 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 NEUROG1Q92886 237 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 MRPL48Q96GC5 212 aaKnown RBP8.49□□□□□ -1.05
NR1I3-220ENST00000505005 RDH12Q96NR8 316 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 INTS14Q96SY0 518 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 DDOQ99489 341 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 PIMREGQ9BSJ6 248 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 NMNAT2Q9BZQ4 307 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 WNT5BQ9H1J7 359 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 NTN4Q9HB63 628 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 DECR2Q9NUI1 292 aa8.49□□□□□ -1.05
NR1I3-220ENST00000505005 MYO9AB2RTY4 2548 aa8.48□□□□□ -1.05
NR1I3-220ENST00000505005 PDZD2O15018 2839 aa8.48□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
NR1I3-220ENST00000505005 ACOD1A6NK06 481 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms