RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 STUB1Q9UNE7 303 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 ZGRF1Q86YA3 2104 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 C5orf63A6NC05 138 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 OR6C65A6NJZ3 312 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 AIREO43918 545 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 KRT8P05787 483 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 TPOP07202 933 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 GLI4P10075 376 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 ZNF823P16415 610 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 CD53P19397 219 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 COX5AP20674 150 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 CRYGSP22914 178 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 PTGER4P35408 488 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 CAPZA2P47755 286 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 ZNF84P51523 738 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 TAS2R43P59537 309 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 VBP1P61758 197 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 LSM3P62310 102 aaKnown RBP9.1□□□□□ -0.95
TPM3-217ENST00000504663 ARF1P84077 181 aaKnown RBP9.1□□□□□ -0.95
TPM3-217ENST00000504663 HGFACQ04756 655 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 NFATC3Q12968 1075 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 LY6DQ14210 128 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 SGCAQ16586 387 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 WDR38Q5JTN6 314 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 FBXW9Q5XUX1 488 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 RPL22L1Q6P5R6 122 aaKnown RBP9.1□□□□□ -0.95
TPM3-217ENST00000504663 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 ARL9Q6T311 187 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 NCCRP1Q6ZVX7 275 aaPredicted RBP9.1□□□□□ -0.95
TPM3-217ENST00000504663 SPATC1Q76KD6 591 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 P4HA3Q7Z4N8 544 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 KCTD20Q7Z5Y7 419 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 CATSPERDQ86XM0 798 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 SKA3Q8IX90 412 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 SLC22A24Q8N4F4 322 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 OR10H5Q8NGA6 315 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 OR6K3Q8NGY3 331 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 OR2G2Q8NGZ5 317 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 PPP1R14AQ96A00 147 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 ZNF75AQ96N20 296 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 SH3GL3Q99963 347 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 C1orf198Q9H425 327 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 B3GAT2Q9NPZ5 323 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 FAM206AQ9NX38 181 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 FRRS1LQ9P0K9 344 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 PMF1-BGLAPU3KQ54 211 aa9.1□□□□□ -0.95
TPM3-217ENST00000504663 TPRP12270 2363 aaKnown RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 IGSF10Q6WRI0 2623 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 TRBV5-5A0A0J9YX44 114 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 TRDV1A0A1B0GX56 115 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 OR6C6A6NF89 314 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 E9PLN8 166 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 GABRPO00591 440 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 SYNGR3O43761 229 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 ZFPL1O95159 310 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 PATE4P0C8F1 98 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 EDN3P14138 238 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 GABRA1P14867 456 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 ZNF32P17041 273 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 NPR2P20594 1047 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 IGHV1-2P23083 117 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 CTSSP25774 331 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 FGF9P31371 208 aaPredicted RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 DCTDP32321 178 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 TIMP3P35625 211 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 GDI2P50395 445 aaKnown RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 ASPHD2Q6ICH7 369 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 UNQ9370/PRO34162Q6UXP9 181 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 C3P1Q6ZMU1 363 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 RHOUQ7L0Q8 258 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 MCEMP1Q8IX19 187 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 LRRC18Q8N456 261 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 YIPF7Q8N8F6 280 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 TEX19Q8NA77 164 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 OR1K1Q8NGR3 316 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 OR10AC1Q8NH08 325 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 DYNC2LI1Q8TCX1 351 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 BCL2L2Q92843 193 aaPredicted RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 BOD1Q96IK1 185 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 DACH2Q96NX9 599 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 PDCD1LG2Q9BQ51 273 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 CHCHD6Q9BRQ6 235 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 TXNL4BQ9NX01 149 aaKnown RBP9.09□□□□□ -0.95
TPM3-217ENST00000504663 PTTG2Q9NZH5 202 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 IKZF2Q9UKS7 526 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 R4GMQ9 66 aa9.09□□□□□ -0.95
TPM3-217ENST00000504663 SMG1Q96Q15 3661 aaKnown RBP9.08□□□□□ -0.96
TPM3-217ENST00000504663 SPTA1P02549 2419 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 FIGNL2A6NMB9 653 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 ZNF878C9JN71 531 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 ZNF587BE7ETH6 402 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 SLC22A1O15245 554 aa9.08□□□□□ -0.96
TPM3-217ENST00000504663 PIN1P1O15428 100 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms