RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RNF13O43567 381 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 FAM20BO75063 409 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 SLC2A10O95528 541 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 CLIC3O95833 236 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 CHRNGP07510 517 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 GCAP28676 217 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 GATA4P43694 442 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 HTR5AP47898 357 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 BMXP51813 675 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 MRPS34P82930 218 aaKnown RBP10.16□□□□□ -0.78
LSM6-204ENST00000504181 DGCR2P98153 550 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 HIST3H3Q16695 136 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 LRRC75BQ2VPJ9 315 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 PDCD4Q53EL6 469 aaKnown RBP10.16□□□□□ -0.78
LSM6-204ENST00000504181 ARSJQ5FYB0 599 aaPredicted RBP10.16□□□□□ -0.78
LSM6-204ENST00000504181 ANXA8L1Q5VT79 327 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 COMTD1Q86VU5 262 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 FGFRL1Q8N441 504 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 BOLLQ8N9W6 283 aaKnown RBP10.16□□□□□ -0.78
LSM6-204ENST00000504181 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 NOXO1Q8NFA2 376 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 ST8SIA4Q92187 359 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 WNT10AQ9GZT5 417 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 CACYBPQ9HB71 228 aaKnown RBP10.16□□□□□ -0.78
LSM6-204ENST00000504181 ZDHHC18Q9NUE0 388 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 TBCCD1Q9NVR7 557 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 P2RX2Q9UBL9 471 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 DCDC2Q9UHG0 476 aa10.16□□□□□ -0.78
LSM6-204ENST00000504181 CRISP3P54108 245 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 CASP8Q14790 479 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 KCNJ8Q15842 424 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 OR2T2Q6IF00 324 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 HOMEZQ8IX15 550 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 Q8N2B8 174 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 SPATA4Q8NEY3 305 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 OR8G5Q8NG78 346 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 OR11L1Q8NGX0 322 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 OR13G1Q8NGZ3 307 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 DNAJA4Q8WW22 397 aaPredicted RBP10.15□□□□□ -0.78
LSM6-204ENST00000504181 PRR25Q96S07 402 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 PCDHAC1Q9H158 963 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 MUC13Q9H3R2 512 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 UFSP2Q9NUQ7 469 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 TAS2R5Q9NYW4 299 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 CALML5Q9NZT1 146 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 UGT2A1Q9Y4X1 527 aa10.15□□□□□ -0.78
LSM6-204ENST00000504181 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 WDR91A4D1P6 747 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 JTBO76095 146 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 ECDO95905 644 aaPredicted RBP10.14□□□□□ -0.79
LSM6-204ENST00000504181 GYPAP02724 150 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 CPA3P15088 417 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 OR8B8Q15620 311 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 CLEC12AQ5QGZ9 265 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 C10orf128Q5T292 105 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 PRAMEF6Q5VXH4 476 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 C1orf94Q6P1W5 598 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 ULK3Q6PHR2 472 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 UNQ9370/PRO34162Q6UXP9 181 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 RANBP3LQ86VV4 465 aaPredicted RBP10.14□□□□□ -0.79
LSM6-204ENST00000504181 CMTM4Q8IZR5 234 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 C10orf111Q8N326 155 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 Q8N7P7 452 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 LSMEM1Q8N8F7 131 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 BHLHE23Q8NDY6 225 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 PTP4A1Q93096 173 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 CDCA4Q9BXL8 241 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 SELENONQ9NZV5 590 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 IFT52Q9Y366 437 aa10.14□□□□□ -0.79
LSM6-204ENST00000504181 A0A087WUV0 522 aaPredicted RBP10.13□□□□□ -0.79
LSM6-204ENST00000504181 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TCRBV4S1A1TA0A5B7 111 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 CCDC154A6NI56 674 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 LGALS8O00214 317 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 PLIN3O60664 434 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 HLA-DPB1P04440 258 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 FGF4P08620 206 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 ETFAP13804 333 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TUBG1P23258 451 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 LAP3P28838 519 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 CDKN2CP42773 168 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TXNL4AP83876 142 aaKnown RBP10.13□□□□□ -0.79
LSM6-204ENST00000504181 SLC7A5Q01650 507 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 FMODQ06828 376 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 SPANXN4Q5MJ08 99 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 FAM91A1Q658Y4 838 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 LIAT1Q6ZQX7 453 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 C10orf107Q8IVU9 208 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 CLDN22Q8N7P3 220 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 Q8TCH9 128 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 ACMSDQ8TDX5 336 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TNFRSF14Q92956 283 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 MRPL13Q9BYD1 178 aaKnown RBP10.13□□□□□ -0.79
LSM6-204ENST00000504181 TUBG2Q9NRH3 451 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 NDRG4Q9ULP0 352 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms