RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CXCL9Q07325 125 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 KCNMB1Q16558 191 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MICBQ29980 383 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SPIN4Q56A73 249 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CNIH2Q6PI25 160 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RASL11AQ6T310 242 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 DPPA3Q6W0C5 159 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PRRT2Q7Z6L0 340 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MFSD4AQ8N468 514 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RYBPQ8N488 228 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM116Q8NCL8 245 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 OR13C8Q8NGS7 320 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 NUBPLQ8TB37 319 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MRPS24Q96EL2 167 aaKnown RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 GUCD1Q96NT3 240 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SIGLEC11Q96RL6 698 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PILRBQ9UKJ0 227 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RGPD8O14715 1765 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 IGKV5-2P06315 115 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 IQCF3P0C7M6 154 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CYB561P49447 251 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 KLRC3Q07444 240 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SRSF4Q08170 494 aaKnown RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SHBQ15464 509 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 C5orf64Q2M2E5 130 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PGGHGQ32M88 737 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PRRT3Q5FWE3 981 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ADNP2Q6IQ32 1131 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 Q6ZSR9 355 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RBMXL3Q8N7X1 1067 aaKnown RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 OR6C1Q96RD1 312 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 P2RX4Q99571 388 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 HSD17B14Q9BPX1 270 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF780BQ9Y6R6 833 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 A0A1W2PR80 420 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 C9orf170A2RU37 121 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 F5H768 121 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ISLRO14498 428 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ECI2O75521 394 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MT-ND6P03923 174 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SLC35G6P0C7Q6 338 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GABRA1P14867 456 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 PPIBP23284 216 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GIFP27352 417 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 IDH3AP50213 366 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 UFM1P61960 85 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SCARF1Q14162 830 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF791Q3KP31 576 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ALG10Q5BKT4 473 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ALG10BQ5I7T1 473 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TRIM40Q6P9F5 258 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ENPP6Q6UWR7 440 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 BHLHA15Q7RTS1 189 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 PIGZQ86VD9 579 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 QTRT1Q9BXR0 403 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MRPL13Q9BYD1 178 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TPSD1Q9BZJ3 242 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SIRPDQ9H106 197 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MRPL16Q9NX20 251 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RIMS3Q9UJD0 308 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MKRN2OSH3BPM6 223 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 J3KTA2 159 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 K7EQS6 105 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RBFOX2O43251 390 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ERI3O43414 337 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 FTH1P19P0C7X4 201 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MAPTP10636 758 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GABRA4P48169 554 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LSM6P62312 80 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SNRPNP63162 240 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SSX1Q16384 188 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF385BQ569K4 471 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF66Q6ZN08 573 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 OVCH1Q7RTY7 1134 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SPICQ8N5J4 248 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 OR5AN1Q8NGI8 311 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LMX1AQ8TE12 382 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RAX2Q96IS3 184 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TXNRD2Q9NNW7 524 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SEMA5BQ9P283 1151 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CRLS1Q9UJA2 301 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TRAV39A0A0B4J263 110 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 OR4A8P0C604 315 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CT45A8P0DMV1 189 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CT45A9P0DMV2 189 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SSTR1P30872 391 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GABRA5P31644 462 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MTNR1AP48039 350 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TNXAQ16473 311 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CEACAM21Q3KPI0 293 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 KHDC3LQ587J8 217 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CT45A2Q5DJT8 189 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MORN1Q5T089 497 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM244Q5VVB8 128 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms