RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 HMGCLP35914 325 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 VHLP40337 213 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TNFSF9P41273 254 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZFP36L2P47974 494 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 PCYT1AP49585 367 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRLHRP49683 370 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 KLK7P49862 253 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 DAP3P51398 398 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 HERV-K104P61576 105 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPL10AP62906 217 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ELAVL2Q12926 359 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TPBGQ13641 420 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 KLF9Q13886 244 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TFDP2Q14188 446 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MTF1Q14872 753 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 NFATC4Q14934 902 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 OXA1LQ15070 435 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 PDK2Q15119 407 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 UAP1Q16222 522 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SGCAQ16586 387 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 UPP1Q16831 310 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 DNAL1Q4LDG9 190 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 EIPR1Q53HC9 387 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CARD16Q5EG05 197 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TPRG1LQ5T0D9 272 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 IRAK1BP1Q5VVH5 260 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 C8orf82Q6P1X6 216 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 EMBQ6PCB8 327 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CD300LGQ6UXG3 332 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ALKAL1Q6UXT8 129 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CERS6Q6ZMG9 384 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 NUFIP2Q7Z417 695 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 PHF13Q86YI8 300 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF547Q8IVP9 402 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC22A15Q8IZD6 547 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MCOLN2Q8IZK6 566 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 NECAP1Q8NC96 275 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 VN1R2Q8NFZ6 395 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR2L2Q8NH16 312 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPLP0P6Q8NHW5 317 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC7A13Q8TCU3 470 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZPLD1Q8TCW7 415 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 UFD1Q92890 307 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MAGOHBQ96A72 148 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SMIM10Q96HG1 83 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 HSFY1Q96LI6 401 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM218AQ96MZ4 157 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 RBBP8Q99708 897 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC35A5Q9BS91 424 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 DCUN1D5Q9BTE7 237 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM59Q9BXS4 323 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 DGCR6LQ9BY27 220 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CXCL16Q9H2A7 254 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 REEP4Q9H6H4 257 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 EML4Q9HC35 981 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MED4Q9NPJ6 270 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MEPEQ9NQ76 525 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CISHQ9NSE2 258 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 INTS9Q9NV88 658 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 THUMPD1Q9NXG2 353 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 NUDT4Q9NZJ9 180 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MAT2BQ9NZL9 334 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF282Q9UDV7 671 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TBL2Q9Y4P3 447 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 MYH11P35749 1972 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 EVPLQ92817 2033 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CFAP54Q96N23 3096 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 RALGAPA2Q2PPJ7 1873 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF318Q5VUA4 2279 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 MYH9P35579 1960 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 SMIM28A0A1B0GU29 152 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 A0A1B0GW55 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 WDR91A4D1P6 747 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR5B21A6NL26 309 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 USP27XA6NNY8 438 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 CENPBD1B2RD01 187 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 IDSB3KWA1 339 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GOLGA8KD6RF30 607 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRMT5O14744 637 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GPX5O75715 221 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPP14O95059 124 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 LYPD3O95274 346 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 NSA2O95478 260 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 IFNA6P05013 189 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPLP0P05388 317 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GPIP06744 558 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L2P0CJ85 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L3P0CJ86 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L4P0CJ87 422 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L5P0CJ88 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L6P0CJ89 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L7P0CJ90 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PET100P0DJ07 73 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC2A2P11168 524 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR1E1P30953 314 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 FGF9P31371 208 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PCK1P35558 622 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 COILP38432 576 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms