RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ZNF774Q6NX45 483 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 TMEM154Q6P9G4 183 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 SEZ6L2Q6UXD5 910 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 USP51Q70EK9 711 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 SLC16A9Q7RTY1 509 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 DPY19L4Q7Z388 723 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 IL17RDQ8NFM7 739 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 PIK3IP1Q96FE7 263 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 ZNF75AQ96N20 296 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 ZNF184Q99676 751 aaPredicted RBP17.4■□□□□ 0.38
CTSD-206ENST00000497544 WNT5BQ9H1J7 359 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 C1orf198Q9H425 327 aa17.4■□□□□ 0.38
CTSD-206ENST00000497544 GSX1Q9H4S2 264 aaPredicted RBP17.4■□□□□ 0.38
CTSD-206ENST00000497544 GDF2Q9UK05 429 aaPredicted RBP17.4■□□□□ 0.38
CTSD-206ENST00000497544 DPRXA6NFQ7 191 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 DOK2O60496 412 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 GOSR1O95249 250 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CRYAAP02489 173 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CD3EP07766 207 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CELA3BP08861 270 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 MRPL3P09001 348 aaKnown RBP17.39■□□□□ 0.37
CTSD-206ENST00000497544 CECR9P0C854 216 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 APLNRP35414 380 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 MTNR1AP48039 350 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 HIST1H3AP68431 136 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 POU4F2Q12837 409 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 EIF2B1Q14232 305 aaKnown RBP17.39■□□□□ 0.37
CTSD-206ENST00000497544 GGTLC2Q14390 218 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 PCK2Q16822 640 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CCDC92Q53HC0 331 aaPredicted RBP17.39■□□□□ 0.37
CTSD-206ENST00000497544 HIST2H3PS2Q5TEC6 136 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 HIST2H3AQ71DI3 136 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 DCXRQ7Z4W1 244 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 OR51G2Q8NGK0 314 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 OR1J2Q8NGS2 313 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CNIH3Q8TBE1 160 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 THEM6Q8WUY1 208 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 APH1BQ8WW43 257 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 MS4A3Q96HJ5 214 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 CNN2Q99439 309 aaKnown RBP17.39■□□□□ 0.37
CTSD-206ENST00000497544 YIPF3Q9GZM5 350 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 RAB26Q9ULW5 256 aa17.39■□□□□ 0.37
CTSD-206ENST00000497544 RPL36Q9Y3U8 105 aaKnown RBP17.39■□□□□ 0.37
CTSD-206ENST00000497544 A6NNC1 897 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 DEFB108AA8MXU0 73 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 WBP4O75554 376 aaKnown RBP17.38■□□□□ 0.37
CTSD-206ENST00000497544 SBK2P0C263 348 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 STOMP27105 288 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 APEX1P27695 318 aaKnown RBP17.38■□□□□ 0.37
CTSD-206ENST00000497544 BSPH1Q075Z2 132 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 CDK5R2Q13319 367 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 ELFN2Q5R3F8 820 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 VASH1Q7L8A9 365 aaPredicted RBP17.38■□□□□ 0.37
CTSD-206ENST00000497544 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
CTSD-206ENST00000497544 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 CPEB3Q8NE35 698 aaKnown RBP17.38■□□□□ 0.37
CTSD-206ENST00000497544 OTOSQ8NHW6 89 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 RNFT2Q96EX2 444 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 Q9H521 79 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 ADGRL4Q9HBW9 690 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 AMBNQ9NP70 447 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 LAMP5Q9UJQ1 280 aa17.38■□□□□ 0.37
CTSD-206ENST00000497544 COX5BP10606 129 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 CCNOP22674 350 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 HTR5AP47898 357 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 GDI2P50395 445 aaKnown RBP17.37■□□□□ 0.37
CTSD-206ENST00000497544 NUDT6P53370 316 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 HCCSP53701 268 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 NAAAQ02083 359 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 RAB35Q15286 201 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 TBC1D28Q2M2D7 210 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 CFAP77Q6ZQR2 320 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 CDC20BQ86Y33 519 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 ZNF584Q8IVC4 421 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 SLC35F2Q8IXU6 374 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 SLC30A7Q8NEW0 376 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 OR1F12Q8NHA8 337 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 SMAP2Q8WU79 429 aaPredicted RBP17.37■□□□□ 0.37
CTSD-206ENST00000497544 C14orf79Q96F83 325 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 MAP6Q96JE9 813 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 RADILQ96JH8 1075 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 ANKRD60Q9BZ19 345 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 HDHD2Q9H0R4 259 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 CDH20Q9HBT6 801 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 CENPMQ9NSP4 180 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 TMEM14AQ9Y6G1 99 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 ABCA4P78363 2273 aa17.37■□□□□ 0.37
CTSD-206ENST00000497544 PRRC2AP48634 2157 aaKnown RBP17.36■□□□□ 0.37
CTSD-206ENST00000497544 ABCD4O14678 606 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 SIAH2O43255 324 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 SYNGR3O43761 229 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 LYNP07948 512 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 DBTP11182 482 aaKnown RBP17.36■□□□□ 0.37
CTSD-206ENST00000497544 PSKH1P11801 424 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 MYF6P23409 242 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 TAF13Q15543 124 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 SLC22A25Q6T423 547 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 MYPOPQ86VE0 399 aaPredicted RBP17.36■□□□□ 0.37
CTSD-206ENST00000497544 SLAMF6Q96DU3 332 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 CNBD2Q96M20 576 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms