RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IGLV1-50A0A075B6I6 118 aa2.54□□□□□ -2
SMC4-225ENST00000497203 A0A1B0GW55 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 A6NDN8 102 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RTL8CO15255 209 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MAGEB4O15481 346 aaPredicted RBP2.54□□□□□ -2
SMC4-225ENST00000497203 MED6O75586 246 aa2.54□□□□□ -2
SMC4-225ENST00000497203 HBE1P02100 147 aa2.54□□□□□ -2
SMC4-225ENST00000497203 BCHEP06276 602 aa2.54□□□□□ -2
SMC4-225ENST00000497203 UBTFL6P0CB48 400 aaPredicted RBP2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4L2P0CJ85 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4L3P0CJ86 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4L5P0CJ88 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4L6P0CJ89 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4L7P0CJ90 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RALBP11234 206 aa2.54□□□□□ -2
SMC4-225ENST00000497203 ATF6P18850 670 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RAB3AP20336 220 aa2.54□□□□□ -2
SMC4-225ENST00000497203 U2AF2P26368 475 aaKnown RBP eCLIP2.54□□□□□ -23e-6■■■■□ 23.7
SMC4-225ENST00000497203 PPOXP50336 477 aa2.54□□□□□ -2
SMC4-225ENST00000497203 P2RX1P51575 399 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RAP1AP62834 184 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RAD51Q06609 339 aa2.54□□□□□ -2
SMC4-225ENST00000497203 CDH17Q12864 832 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MADCAM1Q13477 382 aa2.54□□□□□ -2
SMC4-225ENST00000497203 ITIH4Q14624 930 aa2.54□□□□□ -2
SMC4-225ENST00000497203 RGNQ15493 299 aa2.54□□□□□ -2
SMC4-225ENST00000497203 GPR107Q5VW38 600 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MBOAT2Q6ZWT7 520 aa2.54□□□□□ -2
SMC4-225ENST00000497203 FAM184AQ8NB25 1140 aa2.54□□□□□ -2
SMC4-225ENST00000497203 CHST4Q8NCG5 386 aa2.54□□□□□ -2
SMC4-225ENST00000497203 APH1BQ8WW43 257 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MRGPRFQ96AM1 343 aa2.54□□□□□ -2
SMC4-225ENST00000497203 ZNF681Q96N22 645 aa2.54□□□□□ -2
SMC4-225ENST00000497203 OPALINQ96PE5 141 aa2.54□□□□□ -2
SMC4-225ENST00000497203 ANKRD60Q9BZ19 345 aa2.54□□□□□ -2
SMC4-225ENST00000497203 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
SMC4-225ENST00000497203 SAV1Q9H4B6 383 aaPredicted RBP2.54□□□□□ -2
SMC4-225ENST00000497203 TMEM38AQ9H6F2 299 aa2.54□□□□□ -2
SMC4-225ENST00000497203 SYNDIG1Q9H7V2 258 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MRM3Q9HC36 420 aaKnown RBP2.54□□□□□ -2
SMC4-225ENST00000497203 HMG20AQ9NP66 347 aa2.54□□□□□ -2
SMC4-225ENST00000497203 MYOZ2Q9NPC6 264 aa2.54□□□□□ -2
SMC4-225ENST00000497203 DDX18Q9NVP1 670 aaKnown RBP2.54□□□□□ -2
SMC4-225ENST00000497203 CLN6Q9NWW5 311 aa2.54□□□□□ -2
SMC4-225ENST00000497203 PDP1Q9P0J1 537 aaPredicted RBP2.54□□□□□ -2
SMC4-225ENST00000497203 DUX4Q9UBX2 424 aa2.54□□□□□ -2
SMC4-225ENST00000497203 PLEKHG2Q9H7P9 1386 aa2.53□□□□□ -2
SMC4-225ENST00000497203 A0A1B0GTQ1 180 aa2.53□□□□□ -2
SMC4-225ENST00000497203 A0A1W2PP18 115 aa2.53□□□□□ -2
SMC4-225ENST00000497203 A0A1W2PRD5 423 aa2.53□□□□□ -2
SMC4-225ENST00000497203 AIREO43918 545 aa2.53□□□□□ -2
SMC4-225ENST00000497203 RDH16O75452 317 aa2.53□□□□□ -2
SMC4-225ENST00000497203 FLOT1O75955 427 aa2.53□□□□□ -2
SMC4-225ENST00000497203 CD160O95971 181 aa2.53□□□□□ -2
SMC4-225ENST00000497203 CLTAP09496 248 aa2.53□□□□□ -2
SMC4-225ENST00000497203 TLX1NBP0CAT3 122 aa2.53□□□□□ -2
SMC4-225ENST00000497203 UBCP0CG48 685 aaKnown RBP2.53□□□□□ -2
SMC4-225ENST00000497203 IGHV1-8P0DP01 117 aa2.53□□□□□ -2
SMC4-225ENST00000497203 ERGP11308 486 aa2.53□□□□□ -2
SMC4-225ENST00000497203 CCT6AP40227 531 aaKnown RBP2.53□□□□□ -2
SMC4-225ENST00000497203 RPS9P46781 194 aaKnown RBP2.53□□□□□ -2
SMC4-225ENST00000497203 RPS5P46782 204 aaKnown RBP2.53□□□□□ -2
SMC4-225ENST00000497203 CLDN18P56856 261 aa2.53□□□□□ -2
SMC4-225ENST00000497203 SPAG1Q07617 926 aa2.53□□□□□ -2
SMC4-225ENST00000497203 ILKQ13418 452 aa2.53□□□□□ -2
SMC4-225ENST00000497203 PON2Q15165 354 aa2.53□□□□□ -2
SMC4-225ENST00000497203 ORMDL2Q53FV1 153 aa2.53□□□□□ -2
SMC4-225ENST00000497203 METTL21CQ5VZV1 264 aa2.53□□□□□ -2
SMC4-225ENST00000497203 PLCXD3Q63HM9 321 aa2.53□□□□□ -2
SMC4-225ENST00000497203 FBXW12Q6X9E4 464 aa2.53□□□□□ -2
SMC4-225ENST00000497203 ABHD12BQ7Z5M8 362 aaPredicted RBP2.53□□□□□ -2
SMC4-225ENST00000497203 MRPL55Q7Z7F7 128 aaKnown RBP2.53□□□□□ -2
SMC4-225ENST00000497203 APRG1Q8IVJ8 170 aa2.53□□□□□ -2
SMC4-225ENST00000497203 CBR4Q8N4T8 237 aa2.53□□□□□ -2
SMC4-225ENST00000497203 METTL13Q8N6R0 699 aa2.53□□□□□ -2
SMC4-225ENST00000497203 C8orf31Q8N9H6 132 aa2.53□□□□□ -2
SMC4-225ENST00000497203 OR52E2Q8NGJ4 325 aa2.53□□□□□ -2
SMC4-225ENST00000497203 OR6Q1Q8NGQ2 317 aa2.53□□□□□ -2
SMC4-225ENST00000497203 PEX13Q92968 403 aa2.53□□□□□ -2
SMC4-225ENST00000497203 FAM104AQ969W3 186 aa2.53□□□□□ -2
SMC4-225ENST00000497203 C9orf72Q96LT7 481 aa2.53□□□□□ -2
SMC4-225ENST00000497203 NDFIP1Q9BT67 221 aa2.53□□□□□ -2
SMC4-225ENST00000497203 SLC7A5P2Q9GIP4 190 aa2.53□□□□□ -2
SMC4-225ENST00000497203 PIGUQ9H490 435 aa2.53□□□□□ -2
SMC4-225ENST00000497203 LYRM4Q9HD34 91 aa2.53□□□□□ -2
SMC4-225ENST00000497203 AGPAT4Q9NRZ5 378 aa2.53□□□□□ -2
SMC4-225ENST00000497203 PSG11Q9UQ72 335 aa2.53□□□□□ -2
SMC4-225ENST00000497203 MROH7-TTC4A0A0A0MT08 1334 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 IGKV6D-21A0A0A0MT36 114 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 IGLV1-36A0A0B4J1U3 117 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 IGHV5-10-1A0A0J9YXX1 117 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 A0A1B0GVX0 72 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 TSPAN11A1L157 253 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 ANKRD63C9JTQ0 380 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 TEX46H3BTG2 121 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 FCN3O75636 299 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 RP2O75695 350 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 HPRT1P00492 218 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 IFNW1P05000 195 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 CD3GP09693 182 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms