RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MAGIXQ9H6Y5 334 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 ZDHHC8Q9ULC8 765 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 WNK2Q9Y3S1 2297 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 ZSCAN5BA6NJL1 495 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 CLDN25C9JDP6 229 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 TPD52L2O43399 206 aaKnown RBP13.38□□□□□ -0.27
HDAC4-213ENST00000496347 IDH3BO43837 385 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 RENP00797 406 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 NGFP01138 241 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 IGHV1-46P01743 117 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 CALB2P22676 271 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 CDKN2AP42771 156 aaKnown RBP13.38□□□□□ -0.27
HDAC4-213ENST00000496347 RGS6P49758 472 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 TSPAN31Q12999 210 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 CR1LQ2VPA4 569 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 HFEQ30201 348 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 LCN8Q6JVE9 175 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 USP51Q70EK9 711 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 OR1F12Q8NHA8 337 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 SPATA3Q8NHX4 192 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 TIMD4Q96H15 378 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
HDAC4-213ENST00000496347 IFT27Q9BW83 186 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 COA3Q9Y2R0 106 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-213ENST00000496347 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 CDH10Q9Y6N8 788 aa13.38□□□□□ -0.27
HDAC4-213ENST00000496347 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 TIMM8AO60220 97 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-213ENST00000496347 CDC14BO60729 498 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 MSMBP08118 114 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 CD55P08174 381 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 NOS3P29474 1203 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 HMGA2P52926 109 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 COX10Q12887 443 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 LEG1Q6P5S2 330 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 CYP2R1Q6VVX0 501 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 GLCCI1Q86VQ1 547 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 CCDC197Q8NCU1 140 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 GJC3Q8NFK1 279 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 OR52L1Q8NGH7 329 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 GNPDA2Q8TDQ7 276 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 RAB39BQ96DA2 213 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 COQ7Q99807 217 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 TRIM15Q9C019 465 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 NARFLQ9H6Q4 476 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 PRPF19Q9UMS4 504 aaKnown RBP13.37□□□□□ -0.27
HDAC4-213ENST00000496347 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
HDAC4-213ENST00000496347 B2RBV5 119 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 DCTN6O00399 190 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 RER1O15258 196 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 PHF1O43189 567 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-213ENST00000496347 SPRY3O43610 288 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 MPZL1O95297 269 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
HDAC4-213ENST00000496347 KITLGP21583 273 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 SLC3A1Q07837 685 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 TSTQ16762 297 aaKnown RBP13.36□□□□□ -0.27
HDAC4-213ENST00000496347 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 OR6V1Q8N148 313 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 OR51F2Q8NH61 342 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 NSL1Q96IY1 281 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 SAMD8Q96LT4 415 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
HDAC4-213ENST00000496347 TMEFF2Q9UIK5 374 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-213ENST00000496347 TCRBV5S2A0A599 114 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 TNFSF4P23510 183 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 PSG7Q13046 419 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 CCDC92Q53HC0 331 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-213ENST00000496347 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 ZNF770Q6IQ21 691 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-213ENST00000496347 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 OR4C15Q8NGM1 316 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 OR4K13Q8NH42 304 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 APOBEC3DQ96AK3 386 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-213ENST00000496347 TMEM186Q96B77 213 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 TSSK2Q96PF2 358 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 RPRD1BQ9NQG5 326 aaKnown RBP13.35□□□□□ -0.27
HDAC4-213ENST00000496347 KCNG2Q9UJ96 466 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 KLHL21Q9UJP4 597 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 PURGQ9UJV8 347 aaKnown RBP13.35□□□□□ -0.27
HDAC4-213ENST00000496347 B9D1Q9UPM9 204 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 GRIP1Q9Y3R0 1128 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 FBN3Q75N90 2809 aa13.35□□□□□ -0.27
HDAC4-213ENST00000496347 FAM157AC9JC47 383 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 TNFRSF11BO00300 401 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 WNT9BO14905 357 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 UBOX5O94941 541 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 CCNB2O95067 398 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 RAC2P15153 192 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms