RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	ELAC2	Q9BQ52	826 aa	Known RBP	9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	NUAK2	Q9H093	628 aa		9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	DCAF13	Q9NV06	445 aa	Known RBP	9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	PLEK2	Q9NYT0	353 aa		9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	UBAP1	Q9NZ09	502 aa		9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	TMEM5	Q9Y2B1	443 aa		9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	LHFPL6	Q9Y693	200 aa		9.83	□□□□□ -0.84
VTI1A-208	ENST00000494728	IGLV1-36	A0A0B4J1U3	117 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	COX5B	P10606	129 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	RHCE	P18577	417 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	KITLG	P21583	273 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	TNFAIP6	P98066	277 aa	Predicted RBP	9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	AQP6	Q13520	282 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	MOG	Q16653	247 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	GLYAT	Q6IB77	296 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	C1QL2	Q7Z5L3	287 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZER1	Q7Z7L7	766 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	CYP4Z1	Q86W10	505 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR10AD1	Q8NGE0	317 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	FANK1	Q8TC84	345 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	ITLN1	Q8WWA0	313 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	RAB1C	Q92928	201 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	CMBL	Q96DG6	245 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	DCLRE1C	Q96SD1	692 aa	Known RBP	9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	SLC6A7	Q99884	636 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	FAM107B	Q9H098	131 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	FN3K	Q9H479	309 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	ELOVL3	Q9HB03	270 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	SPAG4	Q9NPE6	437 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	MED4	Q9NPJ6	270 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	ESM1	Q9NQ30	184 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	TBCCD1	Q9NVR7	557 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	CGGBP1	Q9UFW8	167 aa	Predicted RBP	9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	RPS6KA6	Q9UK32	745 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728	IER3IP1	Q9Y5U9	82 aa		9.82	□□□□□ -0.84
VTI1A-208	ENST00000494728		A0A0G2JMP0	313 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728		A0A0X1KG70	313 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	UNC119B	A6NIH7	251 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	KHDRBS3	O75525	346 aa	Known RBP	9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	TXNDC12	O95881	172 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	PSKH1	P11801	424 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	SELE	P16581	610 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	GUCA1A	P43080	201 aa	Predicted RBP	9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	ARHGDIA	P52565	204 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	HILS1	P60008	231 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	HIST1H3A	P68431	136 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZMYND11	Q15326	602 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	RSPO1	Q2MKA7	263 aa	Predicted RBP	9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	HSP90B2P	Q58FF3	399 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	HIST2H3PS2	Q5TEC6	136 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	DCAF12L2	Q5VW00	463 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	GPR139	Q6DWJ6	353 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	CORO6	Q6QEF8	472 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	CFAP77	Q6ZQR2	320 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	HIST2H3A	Q71DI3	136 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	ADCK1	Q86TW2	530 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	GLB1L2	Q8IW92	636 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR5AS1	Q8N127	324 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	NPEPL1	Q8NDH3	523 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	DEFB108B	Q8NET1	73 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR2Z1	Q8NG97	314 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR4M2	Q8NGB6	313 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR1F12	Q8NHA8	337 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	C22orf15	Q8WYQ4	148 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	TIMD4	Q96H15	378 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	EGLN1	Q9GZT9	426 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	WDR76	Q9H967	626 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	MMP26	Q9NRE1	261 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	CYSLTR2	Q9NS75	346 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	TMEM106B	Q9NUM4	274 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	PTTG3P	Q9NZH4	202 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZDHHC8	Q9ULC8	765 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	NPTN	Q9Y639	398 aa		9.81	□□□□□ -0.84
VTI1A-208	ENST00000494728	IGHV3-64D	A0A0J9YX35	117 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728		H0YL77	283 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	TRAPPC2L	H3BP13	241 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	ARPC2	O15144	300 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	MLNR	O43193	412 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	AHCYL1	O43865	530 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	SNX3	O60493	162 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	GSTM3	P21266	225 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	MMP16	P51512	607 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	LSM6	P62312	80 aa	Known RBP	9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	HOXA4	Q00056	320 aa	Predicted RBP	9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	KCNMB1	Q16558	191 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZMAT1	Q5H9K5	638 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	LEG1	Q6P5S2	330 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	SMARCD3	Q6STE5	483 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	UNQ6126/PRO20091	Q6UXV3	157 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	DPY19L2P2	Q6ZN68	376 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	RRM2B	Q7LG56	351 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	LINC00346	Q8IVM7	164 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	C1orf174	Q8IYL3	243 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR6V1	Q8N148	313 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	ZNF283	Q8N7M2	679 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	CMTM5	Q96DZ9	223 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	OR2V2	Q96R30	315 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	NMNAT3	Q96T66	252 aa		9.8	□□□□□ -0.84
VTI1A-208	ENST00000494728	WAC	Q9BTA9	647 aa		9.8	□□□□□ -0.84

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