RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 CRADDP78560 199 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 LRRC74AQ0VAA2 488 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 QPRTQ15274 297 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 PPP1R7Q15435 360 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 MPV17L2Q567V2 206 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 FAM43BQ6ZT52 329 aaPredicted RBP2.34□□□□□ -2.03
NCL-210ENST00000494618 TAS2R42Q7RTR8 314 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 TMEM105Q8N8V8 129 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 OR6N1Q8NGY5 312 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 ILKAPQ9H0C8 392 aaPredicted RBP2.34□□□□□ -2.03
NCL-210ENST00000494618 EXOSC4Q9NPD3 245 aaKnown RBP2.34□□□□□ -2.03
NCL-210ENST00000494618 HYPKQ9NX55 129 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 HPCAL4Q9UM19 191 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 CARHSP1Q9Y2V2 147 aaKnown RBP2.34□□□□□ -2.03
NCL-210ENST00000494618 CBY1Q9Y3M2 126 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 TICRRQ7Z2Z1 1910 aa2.34□□□□□ -2.04
NCL-210ENST00000494618 NID2Q14112 1375 aa2.34□□□□□ -2.04
NCL-210ENST00000494618 TRAV19A0A0A6YYK7 116 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 ZNF98A6NK75 572 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 POLR1CO15160 346 aaPredicted RBP2.33□□□□□ -2.04
NCL-210ENST00000494618 REM1O75628 298 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 TROVE2P10155 538 aaKnown RBP eCLIP2.33□□□□□ -2.04
NCL-210ENST00000494618 ZNF250P15622 560 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 ME2P23368 584 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 P2RX1P51575 399 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 ACTR3P61158 418 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 IL15RAQ13261 267 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 TCEAL5Q5H9L2 206 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 MS4A15Q8N5U1 240 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 SPATA4Q8NEY3 305 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 GPR151Q8TDV0 419 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 TCEAL3Q969E4 200 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 NT5C3BQ969T7 300 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 ROPN1BQ9BZX4 212 aaPredicted RBP2.33□□□□□ -2.04
NCL-210ENST00000494618 SLC38A10Q9HBR0 1119 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 ASB3Q9Y575 518 aa2.33□□□□□ -2.04
NCL-210ENST00000494618 TSSC4Q9Y5U2 329 aaPredicted RBP2.33□□□□□ -2.04
NCL-210ENST00000494618 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 GLYATL1P3A0A0U1RQE8 302 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 CCDC169A6NNP5 214 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 VGLL3A8MV65 326 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 CIB2O75838 187 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 TNNI1P19237 187 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 COL8A2P25067 703 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 TNNT2P45379 298 aaPredicted RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 TAS2R31P59538 309 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 SLC25A11Q02978 314 aaKnown RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 BST2Q10589 180 aaKnown RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 FUT5Q11128 374 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 SRSF5Q13243 272 aaKnown RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 PRAMEF5Q5TYX0 476 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 PRAMEF6Q5VXH4 476 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 TVP23CQ96ET8 276 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 CDX2Q99626 313 aaPredicted RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 RSG1Q9BU20 258 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 LHX5Q9H2C1 402 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 SAMSN1Q9NSI8 373 aaKnown RBP2.32□□□□□ -2.04
NCL-210ENST00000494618 SLC2A8Q9NY64 477 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 VANGL2Q9ULK5 521 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 DENND4AQ7Z401 1863 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 SEC16AO15027 2179 aa2.32□□□□□ -2.04
NCL-210ENST00000494618 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 FOXE1O00358 373 aaPredicted RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 CCNHP51946 323 aaPredicted RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 CDKN2DP55273 166 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 ADARB1P78563 741 aaKnown RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 CASP12Q6UXS9 341 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 OR2L3Q8NG85 312 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 OR9K2Q8NGE7 335 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 OR8J1Q8NGP2 316 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 OR2A1Q8NGT9 310 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 ZNF502Q8TBZ5 544 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 SLC7A13Q8TCU3 470 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 SLC2A14Q8TDB8 520 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 N4BP2L2Q92802 583 aaPredicted RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 FBXO32Q969P5 355 aa2.31□□□□□ -2.04
NCL-210ENST00000494618 DNAJC1Q96KC8 554 aaKnown RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 LSM7Q9UK45 103 aaKnown RBP2.31□□□□□ -2.04
NCL-210ENST00000494618 ARHGEF35A5YM69 484 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 C5orf63A6NC05 138 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 CDC40O60508 579 aaKnown RBP eCLIP2.3□□□□□ -2.041e-7■□□□□ 10
NCL-210ENST00000494618 SLC22A5O76082 557 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 SERPINA3P01011 423 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 P0C880 135 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 PABPC4LP0CB38 370 aaKnown RBP2.3□□□□□ -2.04
NCL-210ENST00000494618 FOXN2P32314 431 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 GDI2P50395 445 aaKnown RBP2.3□□□□□ -2.04
NCL-210ENST00000494618 TPMTP51580 245 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 PLP1P60201 277 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 CCNA1P78396 465 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 CDK5Q00535 292 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 RCAN2Q14206 197 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 MAJINQ3KP22 176 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
NCL-210ENST00000494618 TTLQ8NG68 377 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms