RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 NUAK2Q9H093 628 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 SPAG4Q9NPE6 437 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 NRIP3Q9NQ35 241 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 DCAF13Q9NV06 445 aaKnown RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ASH2LQ9UBL3 628 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 PURGQ9UJV8 347 aaKnown RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 AHCYL1O43865 530 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 GMNNO75496 209 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 ADH4P08319 380 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 COX5BP10606 129 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 LIPAP38571 399 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 CDKN2AP42771 156 aaKnown RBP12.39□□□□□ -0.43
ATG4B-223ENST00000493618 SPIBQ01892 262 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 AQP6Q13520 282 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 KRT72Q14CN4 511 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 MEP1BQ16820 701 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 DCAF12L2Q5VW00 463 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 GLB1L2Q8IW92 636 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 C1orf174Q8IYL3 243 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 OR5AS1Q8N127 324 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 NPEPL1Q8NDH3 523 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 GPX7Q96SL4 187 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-223ENST00000493618 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 PTTG3PQ9NZH4 202 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 VSX1Q9NZR4 365 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-223ENST00000493618 SAMD4AQ9UPU9 718 aaKnown RBP12.39□□□□□ -0.43
ATG4B-223ENST00000493618 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
ATG4B-223ENST00000493618 WNK2Q9Y3S1 2297 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 RER1O15258 196 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 CD55P08174 381 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 SBK2P0C263 348 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 EPHA1P21709 976 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 PRDX6P30041 224 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 HLXQ14774 488 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-223ENST00000493618 ZMAT1Q5H9K5 638 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 SMARCD3Q6STE5 483 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 DPY19L2P2Q6ZN68 376 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 OR1F12Q8NHA8 337 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 FANK1Q8TC84 345 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-223ENST00000493618 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 FUZQ9BT04 418 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 WACQ9BTA9 647 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 CGGBP1Q9UFW8 167 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-223ENST00000493618 NPTNQ9Y639 398 aa12.38□□□□□ -0.43
ATG4B-223ENST00000493618 A0A0G2JMP0 313 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 A0A0X1KG70 313 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 OR6C6A6NF89 314 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 DCTN6O00399 190 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 GADD45GO95257 159 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 LSM6P62312 80 aaKnown RBP12.37□□□□□ -0.43
ATG4B-223ENST00000493618 SLC3A1Q07837 685 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 LEG1Q6P5S2 330 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 ZER1Q7Z7L7 766 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 PEG10Q86TG7 708 aaKnown RBP12.37□□□□□ -0.43
ATG4B-223ENST00000493618 ADCK1Q86TW2 530 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 OR4M2Q8NGB6 313 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 PYURFQ96I23 114 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 FN3KQ9H479 309 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
ATG4B-223ENST00000493618 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-223ENST00000493618 TMEM106BQ9NUM4 274 aa12.37□□□□□ -0.43
ATG4B-223ENST00000493618 SNX3O60493 162 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 TXNDC12O95881 172 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 SEMG1P04279 462 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 KITLGP21583 273 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 TNFSF4P23510 183 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 ZFP36P26651 326 aaKnown RBP12.36□□□□□ -0.43
ATG4B-223ENST00000493618 PRSS12P56730 875 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 OR2T2Q6IF00 324 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 OR4K13Q8NH42 304 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 ST7LQ8TDW4 575 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-223ENST00000493618 PTP4A1Q93096 173 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 HAVCR1Q96D42 359 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 SAMD8Q96LT4 415 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 NMNAT3Q96T66 252 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 SLC6A7Q99884 636 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 OR52D1Q9H346 318 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 C7orf69Q9H7B7 122 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 PCDHB10Q9UN67 800 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 LHFPL6Q9Y693 200 aa12.36□□□□□ -0.43
ATG4B-223ENST00000493618 IGLV1-36A0A0B4J1U3 117 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 H0YL77 283 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 OR10H3O60404 316 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms