RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 LRP11Q86VZ4 500 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 ZCCHC24Q8N2G6 241 aaKnown RBP12.05□□□□□ -0.48
MMP11-213ENST00000493132 PARP8Q8N3A8 854 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 ATG16L2Q8NAA4 619 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 CPEB3Q8NE35 698 aaKnown RBP12.05□□□□□ -0.48
MMP11-213ENST00000493132 ZNF555Q8NEP9 628 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 SDR9C7Q8NEX9 313 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 FAM168AQ92567 244 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 TSSK2Q96PF2 358 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 FEVQ99581 238 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 REG4Q9BYZ8 158 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 NUAK2Q9H093 628 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 WNT5BQ9H1J7 359 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 KRT84Q9NSB2 600 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
MMP11-213ENST00000493132 KIF17Q9P2E2 1029 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 COA3Q9Y2R0 106 aaPredicted RBP12.05□□□□□ -0.48
MMP11-213ENST00000493132 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
MMP11-213ENST00000493132 NSD1Q96L73 2696 aaPredicted RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 LOC100130705A0A1B0GUX0 176 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 FAM171A2A8MVW0 826 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 M0R233 179 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 AHCYL1O43865 530 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 DOK2O60496 412 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 MPZL1O95297 269 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 LY6G6DO95868 133 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 TXNDC12O95881 172 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 HIST1H1CP16403 213 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 POLR2IP36954 125 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 ALDH3B1P43353 468 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 HTR5AP47898 357 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 GLO1Q04760 184 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 SPATA46Q5T0L3 261 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 GLB1L2Q8IW92 636 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 C8orf59Q8N0T1 100 aaPredicted RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 LINC00471Q8N535 108 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 NMNAT3Q96T66 252 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 YTHDF1Q9BYJ9 559 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 PLA2G12AQ9BZM1 189 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 RPRD1BQ9NQG5 326 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 MYEF2Q9P2K5 600 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
MMP11-213ENST00000493132 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 HSPE1-MOB4S4R3N1 261 aa12.04□□□□□ -0.48
MMP11-213ENST00000493132 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 TRIM64CA6NLI5 447 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 SYNGR3O43761 229 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 GASTP01350 101 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 HEXAP06865 529 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 CSF3P09919 207 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 APEHP13798 732 aaKnown RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 PDLIM4P50479 330 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 DSCR9P59020 149 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 ISL1P61371 349 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
MMP11-213ENST00000493132 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 MEP1BQ16820 701 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 NKPD1Q17RQ9 610 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 RFPL4BQ6ZWI9 263 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 THAP5Q7Z6K1 395 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 ALDH16A1Q8IZ83 802 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 OR8D4Q8NGM9 314 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 OR1J1Q8NGS3 322 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 HRASLS5Q96KN8 279 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 DOK1Q99704 481 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 NIPSNAP1Q9BPW8 284 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 DGCR6LQ9BY27 220 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 BCL2L14Q9BZR8 327 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 EIF3KQ9UBQ5 218 aaKnown RBP12.03□□□□□ -0.48
MMP11-213ENST00000493132 MYRFQ9Y2G1 1151 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 ABCA1O95477 2261 aa12.03□□□□□ -0.48
MMP11-213ENST00000493132 NF1P21359 2839 aa12.02□□□□□ -0.48
MMP11-213ENST00000493132 LOC100509620A0A075B734 347 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 A6NHS1 94 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 DCTN6O00399 190 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 ARPC3O15145 178 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 SGCEO43556 437 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 CLPTM1O96005 669 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 HLA-DQA2P01906 255 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 IGFBP1P08833 259 aaPredicted RBP12.02□□□□□ -0.49
MMP11-213ENST00000493132 EPHA2P29317 976 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 CRABP1P29762 137 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 WNT5AP41221 380 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 RAD52P43351 418 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 UCP2P55851 309 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 RIPPLY3P57055 190 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 SELENOVP59797 346 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 AQP6Q13520 282 aa12.02□□□□□ -0.49
MMP11-213ENST00000493132 CD300LDQ6UXZ3 194 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms