RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 IMPA2O14732 288 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 RAC2P15153 192 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 EPHA1P21709 976 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 PRDX6P30041 224 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 IFNGR2P38484 337 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 HILS1P60008 231 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 PSME3P61289 254 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 KRR1Q13601 381 aaKnown RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 MESTQ5EB52 335 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 FGD3Q5JSP0 725 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 VASH1Q7L8A9 365 aaPredicted RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 OR2Z1Q8NG97 314 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 OR1F12Q8NHA8 337 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 FAM216AQ8WUB2 273 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 GTF3AQ92664 365 aaKnown RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 RASD2Q96D21 266 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 CMBLQ96DG6 245 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 FAM46AQ96IP4 442 aaKnown RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 TMPRSS13Q9BYE2 586 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 NTN4Q9HB63 628 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 MSL2Q9HCI7 577 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 EMC7Q9NPA0 242 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 DCAF13Q9NV06 445 aaKnown RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 NDUFAF4Q9P032 175 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 ASH2LQ9UBL3 628 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 PURGQ9UJV8 347 aaKnown RBP10.55□□□□□ -0.72
COL6A1-205ENST00000492851 CACNG2Q9Y698 323 aa10.55□□□□□ -0.72
COL6A1-205ENST00000492851 LOC105371242A0A075B767 164 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 H7C1C5 153 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 VENTXO95231 258 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 TXNDC12O95881 172 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 SCG5P05408 212 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 SBK2P0C263 348 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 CTLA4P16410 223 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 FUT4P22083 530 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 OMPP47874 163 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 LCN6P62502 163 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 SMARCD3Q6STE5 483 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 LRRC28Q86X40 367 aaPredicted RBP10.54□□□□□ -0.72
COL6A1-205ENST00000492851 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
COL6A1-205ENST00000492851 ZNF283Q8N7M2 679 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 OR13G1Q8NGZ3 307 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 APOBEC3DQ96AK3 386 aaPredicted RBP10.54□□□□□ -0.72
COL6A1-205ENST00000492851 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 RSRC1Q96IZ7 334 aaKnown RBP10.54□□□□□ -0.72
COL6A1-205ENST00000492851 SYT4Q9H2B2 425 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 RERGLQ9H628 205 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 ZNF446Q9NWS9 450 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 ADA2Q9NZK5 511 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 PPP1R3CQ9UQK1 317 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 COA3Q9Y2R0 106 aaPredicted RBP10.54□□□□□ -0.72
COL6A1-205ENST00000492851 STARD10Q9Y365 291 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 IER3IP1Q9Y5U9 82 aa10.54□□□□□ -0.72
COL6A1-205ENST00000492851 UNC119BA6NIH7 251 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ATP8B1O43520 1251 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 NCK1P16333 377 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 SELEP16581 610 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ADRA2CP18825 462 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 COMPP49747 757 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ACTG1P63261 375 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ECH1Q13011 328 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 RFX4Q33E94 735 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 SLC36A3Q495N2 470 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 FBXW12Q6X9E4 464 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 RBMS3Q6XE24 437 aaKnown RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 BPIFB2Q8N4F0 458 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 GCDHQ92947 438 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 POP5Q969H6 163 aaKnown RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ZMYND19Q96E35 227 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 PYURFQ96I23 114 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 C7orf34Q96L11 122 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 ZNF582Q96NG8 517 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 COQ7Q99807 217 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 NUAK2Q9H093 628 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 HDHD2Q9H0R4 259 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 GMPR2Q9P2T1 348 aaKnown RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
COL6A1-205ENST00000492851 POLR3KQ9Y2Y1 108 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-205ENST00000492851 LRRC30A6NM36 301 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 SOCS2O14508 198 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 ARPC3O15145 178 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 IDH3BO43837 385 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 GADD45GO95257 159 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 RENP00797 406 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 AVPP01185 164 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF26P17031 533 aaPredicted RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 SLC6A6P31641 620 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 CENPAP49450 140 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 SRP9P49458 86 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 BTG1P62324 171 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms