RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 SLC7A5P1Q8MH63 180 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 OR2L13Q8N349 312 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 SVOPLQ8N434 492 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 JAGN1Q8N5M9 183 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 TTC29Q8NA56 475 aaPredicted RBP2.4□□□□□ -2.03
SNX13-209ENST00000492626 OR6T1Q8NGN1 323 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 ADAMTS16Q8TE57 1224 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 ITLN1Q8WWA0 313 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 PANX1Q96RD7 426 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 HAUS4Q9H6D7 363 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 ABCD2Q9UBJ2 740 aa2.4□□□□□ -2.03
SNX13-209ENST00000492626 PI4KAP42356 2102 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 FLNBO75369 2602 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 RAB29O14966 203 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 HOXC4P09017 264 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 LAMP1P11279 417 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 KCNE1P15382 129 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 HOXB6P17509 224 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 IGFBP5P24593 272 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 KPNA2P52292 529 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 PSMD4P55036 377 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 BIDP55957 195 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ADARB1P78563 741 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 GSG1Q2KHT4 349 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ZNF613Q6PF04 617 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TFAP2EQ6VUC0 442 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR5T3Q8NGG3 340 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR2A12Q8NGT7 310 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 PGLYRP4Q96LB8 373 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 JSRP1Q96MG2 331 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 SORT1Q99523 831 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ATP5SQ99766 215 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 SH3GL3Q99963 347 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TMEM59Q9BXS4 323 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 SELENOIQ9C0D9 397 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TBC1D24Q9ULP9 559 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 UBQLN1Q9UMX0 589 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 CACNA1EQ15878 2313 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 CITO14578 2027 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 URB1O60287 2271 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 CDC7O00311 574 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 EEDO75530 441 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 ZNF189O75820 626 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 IGHV3-13P01766 116 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TCN1P20061 433 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 GSSP48637 474 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 MRPL19P49406 292 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 GPR157Q5UAW9 335 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 FGFRL1Q8N441 504 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TPRX1Q8N7U7 411 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 CCDC71LQ8N9Z2 235 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR2L3Q8NG85 312 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ECHDC3Q96DC8 303 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 SMIM14Q96QK8 99 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR8B4Q96RC9 309 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 TEKT3Q9BXF9 490 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 LRTM1Q9HBL6 345 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 IL26Q9NPH9 171 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ZNF302Q9NR11 478 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ZNHIT6Q9NWK9 470 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 PDP1Q9P0J1 537 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 DEC1Q9P2X7 70 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ZNF580Q9UK33 172 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 U3KQA8 63 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 CNOT1A5YKK6 2376 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 LRP4O75096 1905 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 GOLGB1Q14789 3259 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 PTPRQQ9UMZ3 2332 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ARL5CA6NH57 179 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR7A10O76100 309 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 IGHG4P01861 327 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 IGHV1-2P23083 117 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 KIR2DS2P43631 304 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 CARD18P57730 90 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 EIF3EP60228 445 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 ORC2Q13416 577 aaPredicted RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 TIMM50Q3ZCQ8 353 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 FBXL19-AS1Q494R0 122 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 REG3GQ6UW15 175 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 C17orf47Q8NEP4 570 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 OR56B4Q8NH76 319 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 MARC2Q969Z3 335 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 SIGLEC12Q96PQ1 595 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 PAIP2Q9BPZ3 127 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 EBF4Q9BQW3 602 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 PELOQ9BRX2 385 aaKnown RBP2.39□□□□□ -2.03
SNX13-209ENST00000492626 IL22Q9GZX6 179 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 ASF1AQ9Y294 204 aa2.39□□□□□ -2.03
SNX13-209ENST00000492626 IGHV3OR16-10A0A075B7F0 116 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 IGHV7-81A0A0B4J1V7 117 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 OR2AG2A6NM03 316 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CCNB2O95067 398 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SNAPINO95295 136 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 UBTFL1P0CB47 393 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms